| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2888 |
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| Symbol | |
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| ID | 7385996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2409142 |
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| End bp | 2410446 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651905 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002550090 |
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| Protein GI | 222149133 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0536186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATG CGATACGCAC CGTATCGCCG TCCGCCGAGC CGCTGGCACC TGTTGCATTG
AATTCCCCTG CACGAGTCCT GACGGCAAGC CTGGTCGGCA CCACAATCGA ATTCTTTGAT
TTCTACGTCT ATGCAACGGC GGCCGTACTG GTTTTCCCGG CGCTGTTCTT CCCCAACAGC
GATCCGATGA CGGCTCTCCT GGCCTCGTTT GCAACCTTCT CCATCGCGTT TTTCGCCCGT
CCGCTGGGCG CTGTGGTGTT CGGCCATTTC GGTGACCGTA TCGGCCGCAA GACGACGCTG
GTGGCGGCTC TGCTGACAAT GGGCATTTCC ACCGTGGTGA TCGGACTCCT GCCGACCTAT
GCGCAGATCG GCGTGTTTGC GCCGTTGCTG CTGGCGCTGT GCCGGTTCGG CCAGGGCTTT
GGCCTTGGTG GCGAATGGGG TGGAGCCGTA TTGCTGGCAA CCGAAAACGC CCCGGAAGGC
AAGCGCAACT GGTATGCGAT GTTCCCGCAG CTCGGCGCAC CGGTTGGCTT ATTCCTGTCC
TCCGGCATTT TCTGGCTGCT GCTGCATGTG ATTTCCAAGG ACGACCTCAT GGCCTGGGGC
TGGCGTGTTC CGTTCCTGGC CTCCACCCTG CTGATCGTCA TCGGTCTCTG GGTGCGTTTT
TCGATTTCAG AAACACCAGC CTTTCAGAAA GCCATGGACG CCCATGAGCG GGTGGCCGTG
CCCGTCGCCG AGATCTTTGG GAAGTACAAG CGCAGCCTGT TCCTTGGCAC TTTCGTGGCG
CTGGTGACGT TCGTGCTGTT CTACATCGGT ACGGCCTGGC TGCTGTCCTA CAATATCAAG
GTCTTGCAGA TCCCCTTCCT CGACGCTCTG GAAATCCAGA TCATGAGTTC GGTGGTGTTC
GGCATCTTCA TTCCGCTGAC AGCCAAGGTC GGCGACAAGA TCGGTCGTCG CAAGGCGCTG
ATCGGCATTA CCGTGATGAT TGCCGGTTTC TCCTTCCTGC TGCCGGTTCT GCTGACCGCA
GGTGAGACAG GCGTGGCGAT CTTCGCCGCA GGCTCCATGG CCTTGATGGG CATGACCTAC
GCGCTGATCG GGGCTGCCCT GTCGGCCCCC TTCCCGACCA ATGTTCGCTA TACCGGCGCT
TCGCTGACCT TCAACTTCGC AGGCATTGTC GGCGCGTCGC TGGCGCCCTA TGCAGCCACC
TGGCTCCAGG CCAATTACGG CATGGCCTAT GTCGGCTACT ATCTCGGCCT TGCCGCCGCG
ATCACGCTGG TCTGCATTCT CGCATCGCGT AAAGGTGAAG TTTAA
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| Protein sequence | MTDAIRTVSP SAEPLAPVAL NSPARVLTAS LVGTTIEFFD FYVYATAAVL VFPALFFPNS
DPMTALLASF ATFSIAFFAR PLGAVVFGHF GDRIGRKTTL VAALLTMGIS TVVIGLLPTY
AQIGVFAPLL LALCRFGQGF GLGGEWGGAV LLATENAPEG KRNWYAMFPQ LGAPVGLFLS
SGIFWLLLHV ISKDDLMAWG WRVPFLASTL LIVIGLWVRF SISETPAFQK AMDAHERVAV
PVAEIFGKYK RSLFLGTFVA LVTFVLFYIG TAWLLSYNIK VLQIPFLDAL EIQIMSSVVF
GIFIPLTAKV GDKIGRRKAL IGITVMIAGF SFLLPVLLTA GETGVAIFAA GSMALMGMTY
ALIGAALSAP FPTNVRYTGA SLTFNFAGIV GASLAPYAAT WLQANYGMAY VGYYLGLAAA
ITLVCILASR KGEV
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