Gene Avi_2873 details

Gene Information

• Locus tag: Avi_2873
• ID: 7385983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2390036
• End bp: 2391976
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643651892
• Product: amine oxidase flavin-containing
• Protein accession: YP_002550077
• Protein GI: 222149120
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1231] Monoamine oxidase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGAAG GGGCTCTTTT TCCGATCGAG CCGACCTTGA TCATGACGTT CCCGGCCGCT 
CGCCACCCTC TCTTCAATGA CAGGATTGCG ATGTCTTACT CGATTTCCCG CCGCACGCTG 
CTGCGCGGCA TGACAGCCCT GGCCGGTTCT TTTGCGGCTC CGTCTCTCGT CACCGGATTT 
GGCAGCGCCC AGGCGGCCTA CCGAACCAGC AAACCCAACC TGCCAACAGG GTTTGGCAAA 
GGCAAAAGCG TGGCCATCCT GGGCGCGGGT GTTGCCGGGC TGACAGCCGC CCTGACGCTG 
GCACGCAGCG GCTTTTCCGT TCAGATCTTT GAGGCCGACA ACCGCTATGG CGGTCGCAGC 
CTCACGGTGC GCCCGACAAA CGAGCACTAC AAGAGCTGGT GGTTCAAGAA TTATCCTGGC 
ACGCAGGAAT TTTCCGAGAT GTATGTGGAC CGCTATCAGG AGACAGCGGA CAGCCCGGCA 
CCTGACCTGC AAATTTGCCA GTTCATGGAC GACGCCTGGG CCGCGAAGAA ATATGCTGGC 
AAGCCAGTCG AGCTTTACCT GAATGCCGGG CCGGGCCGCA TTCCTTCAAA CCATGTCAAT 
CTCATCGCCC TTTGCCAGGA AATCGGCGTG TCGCTGGAGC CTTACTTCTT CCAGTCGATG 
TCCAACCTGA TGCAGAGCAA AGAGTTCAAC AACGGCGCGC CGGTATCCTT CGCCCAGGCC 
ACATTCAGCC TCTATAGTGA AATGGCGGCG ATGATGTACA AGGTGACGAA AGAAGGCGTG 
CTTTTGCAGG GCGATACCAA TGCCGTGACC CGCGAGAAGC TCAAGGATCT CTACCGTGTT 
TTCGGGGACC TGACAGGCAC CGGCGAGATC CAGACAACGA CCCGGCTCGG CTTCAGCCAT 
CTGCCCGGCG GCTGGCGCGA TGCGCCAAAG ACGCGGGATG CCATCGGGCT CGAAAAGATC 
CTCGATTCGG GCTTCGTTGG CGATCCCACG GCCAATCCGG AATTGACGCC CGGCTCCTTC 
CTGTTCAACA GTTTCAACAC GGATTGGCAG CCAACCTTGA TGCAGCCGGT TGGCGGCATG 
GACCGGATCT GGCAACAATT GCTGCTTCAG GATGTTCCGA CCACGGCCCT ATGGAAAAAG 
GGCAGCAAAC CTCGGCACCC CAAACTCGGC CATCTGGTGC AGCTCAAGAC CAAAGCGTCG 
AAGATCGCCT CCGCTGGGGA AAAAGTGGTC GTGACCTATG AAACGGCTGG CCGGAAAGCC 
GAACAGGCCC AGTTCGATTT TTGCATTTCC ACCATGGCGC CTTCCCTGCT CAACACCATC 
ATTGGCGATT ACCCGGTCCC GCCCGACTTC CGCAAGGGCC TCGAAGCCTT TTCCAAGACC 
GGAAACTGGA ATGATAAGAC CCCCAATCTC TGGACGCCCG CCATCAAGGT TGGTTGGCAG 
GGCAAGGATC GTTTCTGGGA AACGGACAGT GAAATCTATG GCGGTATTTC CTGGACAACG 
GATATTATCG GCCAGATCTG GTACCCTTCC GAGGATTTCA CCGCCCATAC CGGCGTGCTG 
ACCGGTGCCT ATAACCGTGG ACCGCTGGCG GTAGACTACG CAAAGCTGAA CAATACCCAG 
CGCGTCGAAA CCGCCCGCCA GGGGCTTGGC CTGCTGCATC CGGGAAAGAC CGACCAAGTC 
TATCGCGGCG TCTCCATTGC CTGGCAATAT ATGCCACACC AGGTCGGCGG CTGGGCTTCT 
GATACGGCGA CGACAGACGA AAAAGCCTAT CAGCAGATCA CCACCTTCGA GAAGAACGGC 
CGCTTCTTCT GCGCGGGCGA TACCTGGAGC TACCTGCCCG GCTGGCAGGA AGGCTCCGTC 
ACGTCAGCCT ATTGCGCGGT CAACGCCATC GCCCGGACCA TGGACCCGGC CAAATACAGC 
GACTGCGCCT GCTTCCAATG A 

 

Protein sequence

MKEGALFPIE PTLIMTFPAA RHPLFNDRIA MSYSISRRTL LRGMTALAGS FAAPSLVTGF 
GSAQAAYRTS KPNLPTGFGK GKSVAILGAG VAGLTAALTL ARSGFSVQIF EADNRYGGRS 
LTVRPTNEHY KSWWFKNYPG TQEFSEMYVD RYQETADSPA PDLQICQFMD DAWAAKKYAG 
KPVELYLNAG PGRIPSNHVN LIALCQEIGV SLEPYFFQSM SNLMQSKEFN NGAPVSFAQA 
TFSLYSEMAA MMYKVTKEGV LLQGDTNAVT REKLKDLYRV FGDLTGTGEI QTTTRLGFSH 
LPGGWRDAPK TRDAIGLEKI LDSGFVGDPT ANPELTPGSF LFNSFNTDWQ PTLMQPVGGM 
DRIWQQLLLQ DVPTTALWKK GSKPRHPKLG HLVQLKTKAS KIASAGEKVV VTYETAGRKA 
EQAQFDFCIS TMAPSLLNTI IGDYPVPPDF RKGLEAFSKT GNWNDKTPNL WTPAIKVGWQ 
GKDRFWETDS EIYGGISWTT DIIGQIWYPS EDFTAHTGVL TGAYNRGPLA VDYAKLNNTQ 
RVETARQGLG LLHPGKTDQV YRGVSIAWQY MPHQVGGWAS DTATTDEKAY QQITTFEKNG 
RFFCAGDTWS YLPGWQEGSV TSAYCAVNAI ARTMDPAKYS DCACFQ