| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2865 |
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| Symbol | |
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| ID | 7385978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2383359 |
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| End bp | 2383982 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651887 |
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| Product | DNA polymerase III epsilon subunit-like 3-5 exonuclease |
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| Protein accession | YP_002550072 |
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| Protein GI | 222149115 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.161368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACGC CATTGCAGCC CAAAATCATC GCAATCGATT TCGAGACCGC CAATGAAGAG
CGAGGCAGCG CCTGTTCGGT CGGGCTGGCC TTTGTCGAGA ACGGGCAGGT GGTGCGGGTG
GAGGAGCGGT TGATCCGGCC AAAAACCATG CGGTTTTCAT CCTTCAACAT CGCCATTCAC
GGGATTCGGC CTGATCATGT CGAGGATGCG GGCGAGTTTC CCGAGGTGAT GGACGAATTC
GCCGATGATT TCTCGGGCGC GATGGTGGTG GCGCATAATG CCGCCTTCGA TCTGTCGGTG
TGGCGGGCGA GTTGCGATCT CTATCGCCAG CCCTATCCAA GCCTGTCTTA CGTGTGCAGT
GTCAAGCTGG CGCAGAAGGT CTGGCCGCAA TTGCCCTCCC ATCGGCTGAA TGTGCTGGCG
GCACATCTGC AATTGTCCTT CCGGCATCAC AATGCAGCCG AAGATGCGTC GGTTTGCGCG
CAAGCGGTGA TCGCGATGAT GGAGCGCCGG GGCGCGCAGG ACCTGGGCGA GCTTGCTGGC
ATGATGGGGA TTTCCATCGG ACGGCTGTTT CCGGGTGGGT ATCAATCCTG CTCGGTGCGC
AAGCCAGCGC GGGTTTCGGC TTGA
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| Protein sequence | MSTPLQPKII AIDFETANEE RGSACSVGLA FVENGQVVRV EERLIRPKTM RFSSFNIAIH
GIRPDHVEDA GEFPEVMDEF ADDFSGAMVV AHNAAFDLSV WRASCDLYRQ PYPSLSYVCS
VKLAQKVWPQ LPSHRLNVLA AHLQLSFRHH NAAEDASVCA QAVIAMMERR GAQDLGELAG
MMGISIGRLF PGGYQSCSVR KPARVSA
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