| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2858 |
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| Symbol | |
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| ID | 7385973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2378019 |
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| End bp | 2378618 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651882 |
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| Product | cytochrome c oxidase assembly factor transmembrane protein |
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| Protein accession | YP_002550067 |
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| Protein GI | 222149110 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAC TGCGGATCGG GCTTTGGATA TTGGTGGCGG CCTCGGCAGC TTTGCTTGGG
TATCTGACGC TTGAAATCGG CCAATCGAGC CGCACGGTGG GCGAGGCGGC CTATGGTGTG
CCCTTTCAAC TGGTCGACCA GCGGGGACAG GCTGTCAGCG AGCAGGTGCT GCGCGGCAAG
CCGAGCGCGG TGTTCTTCGG CTTCACCCAT TGCCCCGAAG TCTGCCCGAC CACCCTGTTC
GAGCTGGATG GCTGGCTGAA ACAGGTCGAT CCGCAGGGCG GCCATCTGAA TGCCTATTTC
GTTTCCGTCG ATCCTGAACG CGATACGACC GAGATCCTGA ATACCTATGT TTCGAATGTT
TCCGACCGGA TCACCGGCAT TACCGGCGCG CCCGACAAGG TCATGGAGAT GGTCAAGGGC
TTCCGTGTCT ATGCCAAGAA AGTGCCGGTC GACGAGGCCA ATCCAAACGG CGATTACACC
ATGGACCATA CAGCCTCGGT GTTTCTGCTG GATGCGCAGG GCCGGTTCAA AGGCACGATT
GCCTATGGCG AAAACCCGGA AACCGCCGTC CAGAAGCTGC AAAAGCTGAT GAAGGGCTGA
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| Protein sequence | MKRLRIGLWI LVAASAALLG YLTLEIGQSS RTVGEAAYGV PFQLVDQRGQ AVSEQVLRGK
PSAVFFGFTH CPEVCPTTLF ELDGWLKQVD PQGGHLNAYF VSVDPERDTT EILNTYVSNV
SDRITGITGA PDKVMEMVKG FRVYAKKVPV DEANPNGDYT MDHTASVFLL DAQGRFKGTI
AYGENPETAV QKLQKLMKG
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