| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2848 |
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| Symbol | |
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| ID | 7385966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2369656 |
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| End bp | 2370390 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651875 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550060 |
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| Protein GI | 222149103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.362941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGATGA GTGTTATAGG CGTTCCCTTC GGCGCGTTGC TCGGGACGGC GGGAGGCTTC
CTGGGAACAG GAGGCGGGAC ATTTGCAATC CCGCTTCTCG TGCTGTTTGC TGCCTATGAC
CAGAAGCTGG CCCAAGGGAC AGCTTTGGTC ATGGTTGTCA CCAATGTCCT CTATGCCCTG
GTGAAATACC GCAACAAGGG CAGCTTCGAT CTCAAGACGG CCCTTGTGCT GGCCGCCAGT
GGCAGCGTCA CATCGGCGAT CAGCTCTCTC TGGGCCTTAT CGCTGTCGAG CGAGACATTG
AAGCTCTGGT ATGGCGTGTT TTTGATGTTG CTTGCGGCGT TTGTCGCCAT CACGCGAAAC
ATAAAATTCG TCTCACATGG CCTTGATTAT CGATGGGCCT TCTTGCCAGG CGCGATTGGC
GGCATATCGC TCGGCTTGTT TGGGGTCGGA GGCGCCATGC TGGCCGTTCC CTTGTTGGTG
ATGTTCTACG GGCATTCCCA GGTTCGGGCG CAAGGCTTGG GACTGGCGCT GGCACTGCCA
GGATGCAGCA TCAGCCTGAT GCAATACGGC TATTATGGCC ATGTCGATTG GACCCTCGGC
CTCATGTTGG CCATCGGCGG GCTTTTAGGC GTGCCAGCAG GCGTTCATTT GGCCCATAAG
GTGGATGAAC GCACTCTGGT TCTGTCGTTT TGCACATTGC TGATTGCCGC GGGGCTGCTT
GTCATCGTCA AATAG
|
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| Protein sequence | MLMSVIGVPF GALLGTAGGF LGTGGGTFAI PLLVLFAAYD QKLAQGTALV MVVTNVLYAL
VKYRNKGSFD LKTALVLAAS GSVTSAISSL WALSLSSETL KLWYGVFLML LAAFVAITRN
IKFVSHGLDY RWAFLPGAIG GISLGLFGVG GAMLAVPLLV MFYGHSQVRA QGLGLALALP
GCSISLMQYG YYGHVDWTLG LMLAIGGLLG VPAGVHLAHK VDERTLVLSF CTLLIAAGLL
VIVK
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