| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2828 |
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| Symbol | |
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| ID | 7385952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2350112 |
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| End bp | 2353804 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643651861 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550046 |
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| Protein GI | 222149089 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.222073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAGGCA GACTGTTCAT CGCGTTTGGC GGATTGGTCG TGGTGGCGCT GTTTGCCGCG
CTTCTGGCGC CGCTTTTCGT CAACTGGACG GATTTCCGCA AGGATTTCGA GGATCAGGCC
AGCCGTCTTC TTGGTAAAAA GGTGGTGGTC CACGGCGCTG TCGAGGCGCG TATCCTGCCG
TTTCCGTCGA TCACGATGAA TGACGTCACG GTCGGGCCTG GTACTGACGG CAAGACGCTG
GCGCATGTGG CGCGGTTTTC CATGGATGCT GAGCTTGCGC CGTTTCTGTC CGGCGAAGCG
CGGATTTTCG CCATGCGGAT CGAGCAGCCG AATGTGCGGC TGAGATTGTT GCCGGACGGT
TCGCTGGATT GGTTGCAGGG CAGCCAGCCA AGCCTGCCGG GCCGCAATGT CGTGCTGGAA
AAGGTGACGG TCGTCGATGG TGCCGTGACC CTGGTCGATC AGCAGACAGG CCGCACCCGC
CAGATCAACG GTCTCAATGC CGATATGACG GCCCGCTCGC TGGCTGGTCC CTGGACGGTG
TTGGGGCAGG GGGCGCTGGA TGGCCAGTCC GGCAATTTCT CGCTGTCCAG CCTTCAGCCG
GATCCGGCCA AGGGGGCCGT GCCGGTGAAA ATCCATATCG CTCCGGATGC GACGCCCGTC
GATATCGACC TGTCCGGCGA TCTCGCGCTT GTCGACAAGC GTCCGACATT GCAGGGTAGC
TTCCTGGCGG CCCTGCGCGC CAATGCTGAG GACGGTCAGG TCAGCGCACC AATGGGCAAT
CCGGTGCTGC CGCCGCGCAT CAAGGGCAAG TTCGAACTGG CCAATGATCG GGTGCGGATT
CCGGAATACC GGATGGAAAT CGGCGCCAGC GACCAGCCCT ATATCATCAC CGGCGAGGCG
ACGCTGGATA GCGGCAAGGC GCCGGAATTC CTGCTGACAG CCGAGGGCCA GCAGATTGAC
GTCGATAAGC TGACGCCCAG CCTGCCCAAG GGCAAGACCG GTCGGCAGAT GCAGAATTCC
GCCCGCCAGC GCATCCAGTC GCTGATAGCG CTCGCAGACC GGATCCCCAT TCCCGACATG
CCGGGCCGTG CCAGCTTGAA ATTGCCAGCG ATTGTCGCTG GCGATACCGT GATCCGGGAT
ATTACCCTGG ATCTGCGGCC AGCCGGAACC GGCTGGCAGG TGGACAAGGC GGTTGCCACC
CTGCCGGGCC GCACCCAGGC GGAAGCCGCG GGACGGCTAC AACTGAAAGA TCAGGCCTCC
TTTAACGGTT CGCTGCTGGT TGCCTCTAGC CAACCGTCCG GGCTGGCTTC CTGGCTATCG
GGCGATGTCG ATCCGGCCAT CCGGCAATTG CGCACGGCGG GCTTTTCCGC CAATGTCAAC
CTGACCTCCG ACCTGCAACG GTTCGACAAG CTGGAATTGG CCATCGGGCC TGCCAGCCTG
CATGGGCGTC TCGAGCGGCA ATCTGCCGAT GGCGTCATGC CCAGCCTGTC CTTTGATCTC
TCGGGCAATG CCTTCGACTT TGATGCAACG AAGGCACTGG CGTCGCTGGT GTCCGGCGAT
GCCAGCGATG ATGCGCTGCT GAGCCACCAG ATCGCCGGGA ACATCAAGGT CGATGCCTTT
TCGGCATTCG GCATCACGGC TCGTGATGTG GACGGGCTGT TTACCTACAA GGATGGCGGG
TTTTCAGTGC GCAAGCTGGA TATCGGCAAT CTTGCCGGGG CCAGTATCAA GGCGACGGGC
GAAGCCACCG GCTCGCTTGC CGATTATAGT GGCAAGGCGC AGGTCATGCT GCATGCCGGC
GACATCAGCG GATTCCTGGC CATGCTGCAT CAGCAATTGC CACAGCACCC GCTGCTGGCC
CGGCTGGCTT CCAGCGGGCA ATGGTATTCC GATGCCGACG TCGTGGTAAA CACCCGTTTC
GGGGATGCTC AATATGGCGG CTTGCAGGTC GATCTACAGG GCAAGGCCAA TGGCACGACG
GTCGATGCCG CCTATCGGCA GGACAGCCTG TTCGATGTGT TCGACGATTC TGAAAAGAGC
TTTTCGCTGA CCGCTGCCAA TGAAGAACCT TCGGCGCTGT TGGGTCAGCT TGGCTTCGAT
CCGCTGCCGG TGCCGATGGA TGGCGGTGCG AAACTGAGCC TGCAATTGAA ACAGCAGGGC
ACCGCGCCAG CGGATGGCCA GATGTCGCTG ACATCTGGGG CGACCCGGCT TGGGGTAAGC
GGCACGGTCA ATCTTGGTGC GGACCTGTTC TTGCAGGGCA AGGGCAAGAT GGAACTGGCC
AGCGACGATA TTGCCCCATT GCTGATCATG AATGCAGTCA GTCTCCCCGG CATCGACACC
GGTCTGCCGA TCACCCTGAC CGGCGACATC GAGCGGCAGG GCGACAACAA AACGCAATTG
CACGATATCA AAGGCGCGGT TGCGGGCGAC GGTTTGTCCG GCACGCTGGT GCTGGAGCCG
ACCGCTTCCG CAGTTAAAAT CGGCGGTGCT GTTGCGCTGG ATACCATTGA TCTCGAGTGG
CTGGCATCGA CTGTGATCGG CCCGGTCCAG GACCCCGCAT CCGATGCATT GTCGGCGGTA
AAGGTGCAGA CGCCCGTTTG GGGCGACATG CAGATGGACA TCGCCCTCAA AGCTGGCACA
CTCGGTCTTG GCCCGCTGCC CGCTGCCCGT GATGTTGCAG CGCGCCTGAC GCTGGTGGAT
GGCGGCATGG CGCTGGAGGA TATGTCAGGC ACTCTGTTCG GCGGCGCTCT GTCCGGGCGC
ATGTCGCTCG CCAATAATCA GGGTACGGCT TTTCTGCGCA GCAGAGTGTC CCTTGCCAAT
GCGGACTTGG GCAAGATCTG GCCTGACAGC GGCCTGTCTG GCCAAGCCAG GCTACAAGTG
ATGGCGGAAG GCAGTGGTAG CAGCGCCCAA GGCCTGCTGG GATCGGTCAA CGGTTCCGGC
CAGGTCGATC TCTCCGCCTT GGCTATCCCG GAACTGGACC TGTCCAGCTT TCCGGCGCTC
TCGGTGGCTT TTGGTGCCGC AACCAGTGAG GTGACGGCGG GGCAGGTCTC CGCAGCCCTC
ACACCGCTTT TGGCCCGCGC GCCAGCCCGA CTGGGCGACG TGACCATGCC GTTTACGCTG
AGTGACGGTA AAGCCCGGAT GCAGGCCGTT AAAGTGCCAG CCAAGGATGC GGCTATCGAG
GCGCAGGCCG TGGTGACGGT TGCCTCTGGT GACGTCGATG CCAATGTCCA GATCGCCTTC
GATCCGGCTA CGGCGGTCTC TGCGCCTGGG GAGGCTATCG CAGCCCAGAC GGGTTCTGGG
CAGGCAACGA CAGGAGATGC CGCGCCGACC GTCCACCTGC TGTTGAGCGG CCGTCTTGCT
GCGCCCAAGC GGCAGCTGGA TGTTCGTGAA ATGGCAAGCT ACCTGTCGCT CCAGGCTTTC
GAGCGTGAGC GCCGACGGGT GGAAACATTG CAAGCGGCTG TGTTGGAAAA GCAAAGGCTG
CGGCGAGAAG TCGCCTATTA TACGGCATTG GCCACGGAGC GTGCGGCGGC GCAGGCCAAG
GCTGCTGCGG CGGCTGATGC CGCAGCACGG GCTGCGGAGG CGGCGGCGAG AGCGGCGGAT
CGCGGTGCGG GTAACACTGC GCCATCAACA CCACGCGATG GGTCGAATAA TGGTTTTAAA
CTGGAGTTGG AGGATTTGCC CGGCGTGCAA TGA
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| Protein sequence | MLGRLFIAFG GLVVVALFAA LLAPLFVNWT DFRKDFEDQA SRLLGKKVVV HGAVEARILP
FPSITMNDVT VGPGTDGKTL AHVARFSMDA ELAPFLSGEA RIFAMRIEQP NVRLRLLPDG
SLDWLQGSQP SLPGRNVVLE KVTVVDGAVT LVDQQTGRTR QINGLNADMT ARSLAGPWTV
LGQGALDGQS GNFSLSSLQP DPAKGAVPVK IHIAPDATPV DIDLSGDLAL VDKRPTLQGS
FLAALRANAE DGQVSAPMGN PVLPPRIKGK FELANDRVRI PEYRMEIGAS DQPYIITGEA
TLDSGKAPEF LLTAEGQQID VDKLTPSLPK GKTGRQMQNS ARQRIQSLIA LADRIPIPDM
PGRASLKLPA IVAGDTVIRD ITLDLRPAGT GWQVDKAVAT LPGRTQAEAA GRLQLKDQAS
FNGSLLVASS QPSGLASWLS GDVDPAIRQL RTAGFSANVN LTSDLQRFDK LELAIGPASL
HGRLERQSAD GVMPSLSFDL SGNAFDFDAT KALASLVSGD ASDDALLSHQ IAGNIKVDAF
SAFGITARDV DGLFTYKDGG FSVRKLDIGN LAGASIKATG EATGSLADYS GKAQVMLHAG
DISGFLAMLH QQLPQHPLLA RLASSGQWYS DADVVVNTRF GDAQYGGLQV DLQGKANGTT
VDAAYRQDSL FDVFDDSEKS FSLTAANEEP SALLGQLGFD PLPVPMDGGA KLSLQLKQQG
TAPADGQMSL TSGATRLGVS GTVNLGADLF LQGKGKMELA SDDIAPLLIM NAVSLPGIDT
GLPITLTGDI ERQGDNKTQL HDIKGAVAGD GLSGTLVLEP TASAVKIGGA VALDTIDLEW
LASTVIGPVQ DPASDALSAV KVQTPVWGDM QMDIALKAGT LGLGPLPAAR DVAARLTLVD
GGMALEDMSG TLFGGALSGR MSLANNQGTA FLRSRVSLAN ADLGKIWPDS GLSGQARLQV
MAEGSGSSAQ GLLGSVNGSG QVDLSALAIP ELDLSSFPAL SVAFGAATSE VTAGQVSAAL
TPLLARAPAR LGDVTMPFTL SDGKARMQAV KVPAKDAAIE AQAVVTVASG DVDANVQIAF
DPATAVSAPG EAIAAQTGSG QATTGDAAPT VHLLLSGRLA APKRQLDVRE MASYLSLQAF
ERERRRVETL QAAVLEKQRL RREVAYYTAL ATERAAAQAK AAAAADAAAR AAEAAARAAD
RGAGNTAPST PRDGSNNGFK LELEDLPGVQ
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