| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2816 |
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| Symbol | hflC |
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| ID | 7385943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2343136 |
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| End bp | 2344053 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651852 |
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| Product | HFLC protein |
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| Protein accession | YP_002550037 |
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| Protein GI | 222149080 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.273715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAATC GTCTTCCTGC CGTGCTGATC GGCTTAGCCA TCGTTCTTCT GCTGGTCTAT
TCGTCGGTTT TCGTCATCAA CCAGCGCCAG CAGGCCGTTG TCGTGCGCTT CGGCCAGATC
AAGGCGGTCT ATAGCGAGCC TGGCCTTTAC TTCAAAATGC CCTTCGCCTT TGCCGGCGCA
GACAAGGTGC AGATCATTTC CGATCAGTCC CTGCGGTTTG ATCTCGACAA TATCCGTGTC
CAGGTTTCCG GCGGCAAGTT CTATGAGGTC GATGCCTTCC TGATCTACAA GATCACCGAT
GCCCGCCGCT TTATCGGGAT CGTTTCGGGT GGTGATCGTG ACCTGGCGGA AGCGCGGCTT
CGCACCCGTC TCAATGCATC CTTGCGTCGG GTCTACGGTC TGCGCGGCTT CGAGGCTGCC
CTGTCGGATG CCCGTTCGCA GATGATGCAG GAGGTTGCCG ACGATCTGAA ATCGGATGCG
GAAAACCTTG GTATTACCAT TGAGGACGTG CGCATTCGCC GCACCGACTT GACCCAGGAG
ATTTCGCAAC AGACCTATGC CCGGATGCGC TCCGAGCGTC TGGCCGAAGC CGAACTGATC
CGGGCGCGTG GTAACGAAGA GGGCCAGCGT CGCCGGGCCA TCGCCGACCG TCAGGTTGTC
GAGTTGCAGG CCGATGCGCA GCGCGATTCG GAAATCCTGC GCGGTCAGGG TGATGCGGAA
CGCAACCGCG TGTTTGCGGA TGCCTATCAG CGCGATCCGT CCTTCTTCGA GTTCTACCGT
TCGATGGCAG CCTATGAGGC ATCGCTGGGT ACCAATGGCA CGTCTATGGT GCTGTCGCCG
AATTCGGAAT TCTTCAAGTT TTTCCGTTCG CAGGCTGGCA CTGGGGCGGC AGCGCCCGCA
GCACCTGCTG CCAACTGA
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| Protein sequence | MTNRLPAVLI GLAIVLLLVY SSVFVINQRQ QAVVVRFGQI KAVYSEPGLY FKMPFAFAGA
DKVQIISDQS LRFDLDNIRV QVSGGKFYEV DAFLIYKITD ARRFIGIVSG GDRDLAEARL
RTRLNASLRR VYGLRGFEAA LSDARSQMMQ EVADDLKSDA ENLGITIEDV RIRRTDLTQE
ISQQTYARMR SERLAEAELI RARGNEEGQR RRAIADRQVV ELQADAQRDS EILRGQGDAE
RNRVFADAYQ RDPSFFEFYR SMAAYEASLG TNGTSMVLSP NSEFFKFFRS QAGTGAAAPA
APAAN
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