Gene Avi_2795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2795 
Symbol 
ID7385930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2328476 
End bp2329168 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID643651839 
Producttranscriptional regulator 
Protein accessionYP_002550024 
Protein GI222149067 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.131484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCC AACCCGAATT TCTTGACGTT ACAGAATCCA TCACTCCCAT CCTGAAAGCA 
GGTCTTGCCA TGATGCCGGA TCTGCCTTTG CCCGAAGATC TACCACCGGA GCCGGTGGCA 
ATTTCCGAAA TGGCCAATCT GTTTGGCGTC ACCCACAGAA CCCTGCATTT CTATGAGGAA 
AAGAACCTTC TCTCCTCAAG CCGCATGGGG CTGATGCGGG TCTATTACCA TCGTGACATT 
ATCCGCATGG CGCTGATCAA CACCTGCCGG GAGATCGGCA TGCCGATTGC CGCCATTCAG 
GATCTGTTTG CCGAACTGAG CGGCACCATC ACTCAGGCAC AAGCCAATGA GCTTCTCAAC 
ACGGCGCTGG AGGCACGAAA ACGGGAATTG ATTGCATCGC AATCGATGAT GTTTCGCCAG 
ATCGAGCAGA TCAACAGCCT TCTCACCCGC GAAGATGACC AGAACGAAAC AGAGACGCCG 
ACTTTGCGCC ATGGTATTGA TCTGACCGAA CTGGAGCATC ACTGCCTGTC GCTAATGGCG 
GAAGGCTATA CCCAGGTGCG GGTGGCACGA ACCATGCAAA TGACCTTCGA AGCGGTGATT 
GCGCTGGAAG CCAGCATCAT GCGCAAGGTC CAGGCGACAA ATCGATTCCA GGCGGTAGCA 
AAAGCGGTGC TGCTGGGCAT CGTTGCCAAT TAG
 
Protein sequence
MAGQPEFLDV TESITPILKA GLAMMPDLPL PEDLPPEPVA ISEMANLFGV THRTLHFYEE 
KNLLSSSRMG LMRVYYHRDI IRMALINTCR EIGMPIAAIQ DLFAELSGTI TQAQANELLN 
TALEARKREL IASQSMMFRQ IEQINSLLTR EDDQNETETP TLRHGIDLTE LEHHCLSLMA 
EGYTQVRVAR TMQMTFEAVI ALEASIMRKV QATNRFQAVA KAVLLGIVAN