| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2793 |
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| Symbol | |
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| ID | 7385928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2326155 |
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| End bp | 2327030 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651837 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550022 |
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| Protein GI | 222149065 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.184352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAA TACTGATTAC CGGAGCATCC GGAAAGCTTG GAAGACTTGT CATCAACCAT
TTGCTGGAAA GCCAGCATGT TGCCGCTGCT GATATCGTCG CTGCCAGCCG CAACCCGTCT
GGTCTGGCGG ATCTTGCCGC AAAAGGCATC GAAACACGTC AGGCCGACTT TACCGATCCG
GCATCGCTTG ACCAGGCCTT TTCCGGCATT GACCGGCTGC TGATCATTTC CACCGATGCC
ATCGGTTCGC GCGTCGAGCA GCACAAGGCA GCGGTTGCCG CCGCCGCCAA TGCCAAGGTC
GGCCGGATTT TCTACACATC CATGCCAAAT CCGGAGACAT CCAAGATCCT GTTTGCTCCC
GAACATGCGC AGACCGAACA GGCCATCAAG GCTTCCGGCC TTGCCTATAC GATTTTGCGC
AACAACTGGT ACATGGAAAA TCTATTCATG ACGCTGCCAT CGGCGCTGGC CAGCGGCCAG
TGGCATACAT CCGCCGGAGA GGGCAAGACC GCCTATATCG CCCGAGAAGA CATTGCCCGC
GCCATTGCCA GCGCCCTGGC CAAGCCAGTG GCCGAAAACA TCGTCTATAC GCTCAGCGGC
AGCCGCGCCT ATAGCAACAG AGAGATTGCC GCCCTGGCCG AAAAAGCCAC GGGCAAGCCG
CTTGCCGTGG TCGACATCAC CGACCAGCAG TTGGAAGACG GCATGGTCGC TGCCGGCATT
CCCAAACCCG TAGCGCCGGT GTTCGCTTCA ATCGATACGG CCATCCGCGC CGGTGACCTG
GATGTGATAA CTGATGATGC GCAAAGCTTG TCGGGCCATC CATTGCTGTC GCTAGAGGCC
TTCATCGAAG CAAACAAGGC CTCCCTCATC GGCTGA
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| Protein sequence | MTKILITGAS GKLGRLVINH LLESQHVAAA DIVAASRNPS GLADLAAKGI ETRQADFTDP
ASLDQAFSGI DRLLIISTDA IGSRVEQHKA AVAAAANAKV GRIFYTSMPN PETSKILFAP
EHAQTEQAIK ASGLAYTILR NNWYMENLFM TLPSALASGQ WHTSAGEGKT AYIAREDIAR
AIASALAKPV AENIVYTLSG SRAYSNREIA ALAEKATGKP LAVVDITDQQ LEDGMVAAGI
PKPVAPVFAS IDTAIRAGDL DVITDDAQSL SGHPLLSLEA FIEANKASLI G
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