| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2772 |
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| Symbol | |
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| ID | 7387173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2310090 |
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| End bp | 2311007 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651823 |
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| Product | phenazine antibiotic biosynthesis related protein |
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| Protein accession | YP_002550008 |
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| Protein GI | 222149051 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
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| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0549944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTCGAC ACTATTGCAT TTACGACGTC TTCACCGACA AAAAGCTGTG CGGCAACCCT
TTGGCAATCG TGTTCGATTG CGAGGATCTC GATGACGATG CGTTGCAGGC GATAGCGCGG
GAATTCAATC TCTCGGAAAC CGTTTTTGTC TTTCCGTCCG TCAATGTCGC GCATGTGGCG
CGTATCCGGA TTTTCACCCC CGGGCGCGAG CTTCCCTTTG CCGGGCATCC CACGGTTGGC
ACGGCGATCG GCCTAGCGGA AAAGGCGCAT CAGGATCGTG AGGGGCCGCT CGATCTGGTG
TCGGTGATCG ATGAAAAGAT TGGTCCGGTG CGCTGTGCCG TCAGCCTGAG GCCGGGTGAG
GCGAGTTTTG CCGAATTCGA TCTGCCGAAA ACCTCCACCC AGATTCAACT GCCGCTCGAC
CGCCAGGGCA TCGCCGATGC GCTTGGCCTG AAGCCGAACC AATTGCTTTT CGAAAACCAT
TTGCCGTCGA TCTGGTCGGC TGGCGTGCCT TTCCTGCTCA TTCCGGTCAG CAGTCTGGGA
GATGTCGAAA GCATCGAGTT CGATCCGCAA CTCTGGGAGC GGGCCGCTCC TTTCTGTGAC
GGCGCGCTGA CCTCGGCCTA TGTCTATTGC CGTGGTGGTG TTCACCACGC GGCGGACTTT
CACGCCCGGA TGTTTTCCCC CGATATGGGC ATAGCCGAGG ACCCGGCCAC AGGCTCGGCG
GTGGCGGCGC TTTCCGGCGC TATCCAGCAT TTCGACGCGC TGCCAGACGG CCACCATCCG
CTGCTGATCG AGCAGGGCGT GGAAATGGGG CGCCCCTCCT TTATCCATCT GCATATCGAT
ACCAAGGAAG GCAAAGTTTT CCGCGCTCGC ATCGGCGGCA CCGCCGTCCG CATCGCTTCC
GGCATGCTCG ACATTTGA
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| Protein sequence | MARHYCIYDV FTDKKLCGNP LAIVFDCEDL DDDALQAIAR EFNLSETVFV FPSVNVAHVA
RIRIFTPGRE LPFAGHPTVG TAIGLAEKAH QDREGPLDLV SVIDEKIGPV RCAVSLRPGE
ASFAEFDLPK TSTQIQLPLD RQGIADALGL KPNQLLFENH LPSIWSAGVP FLLIPVSSLG
DVESIEFDPQ LWERAAPFCD GALTSAYVYC RGGVHHAADF HARMFSPDMG IAEDPATGSA
VAALSGAIQH FDALPDGHHP LLIEQGVEMG RPSFIHLHID TKEGKVFRAR IGGTAVRIAS
GMLDI
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