Gene Avi_2764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2764 
Symbol 
ID7388415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp2304990 
End bp2305652 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content64% 
IMG OID643651817 
Producttranscription antitermination protein 
Protein accessionYP_002550003 
Protein GI222149046 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.365131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAGC ATAACCGTGA CCGTAACCAA CAGACCGTAA TCTCGAACGA AAGGCTCTTG 
AGGCTGGCGC ATGTCACAGC CGTCGAGGCG AGGCGGAAGC GCCAGATCGC CATGGCACGG 
CGCGACCGCC CTGACTTCGA CACGCAGGCT CGCTGGGTGG TGGCGCGCTG CAAGAGCGGC 
CTGGAGCAGG TCATCCGCGA TGCGCTCGCG GAGCAAGGGA TCGACTGCTG GTGCCCCTGC 
GAGCGGCGAA GACTGCCGCC CCGGCGCCGC AAGCCGGCCC TCGTAGTCGA GCGGCCGCTG 
TTCCGAGGCT ATCTGTTCGT GCGGGTGATC CCGGACAATG AGGCCTATGC CGGGCTGCTG 
CTGGCCTCCA GGCTGCAGAG CCTGATGGGG CAGGATGGCA AACCCTATCT TATGCCGGAA 
ACCCTGATGC GGCAGCTGCA ATTATCCGCC AAGGCTGCGG AGAGACGCCA CATGGATGCG 
GGCGATGTCC CGCCGATGCC TGACATGTTG GGCAAGCAGG TGACGATCCG CTCCGGCCCG 
TTTGCCGACT TTGTGGTGAC AGTGCGCAAG GTGCTGTCGA AGCGGGGGCA GGTGGTTGTG 
GATGTTCCGA TGTTCGGTGG CATGAGTGAG GTCACCGTGG GTGTGGAGGC CATCTCGGAG 
TGA
 
Protein sequence
MMQHNRDRNQ QTVISNERLL RLAHVTAVEA RRKRQIAMAR RDRPDFDTQA RWVVARCKSG 
LEQVIRDALA EQGIDCWCPC ERRRLPPRRR KPALVVERPL FRGYLFVRVI PDNEAYAGLL 
LASRLQSLMG QDGKPYLMPE TLMRQLQLSA KAAERRHMDA GDVPPMPDML GKQVTIRSGP 
FADFVVTVRK VLSKRGQVVV DVPMFGGMSE VTVGVEAISE