Gene Avi_2746 details

Gene Information

• Locus tag: Avi_2746
• ID: 7388400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2284711
• End bp: 2286810
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643651803
• Product: hypothetical protein
• Protein accession: YP_002549989
• Protein GI: 222149032

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.439387
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAAG ACCCATTGAA TACGTTCGCC ACTGAACTTG CGTCCGAGAT TGAGGAGATC 
GTCATTGGTG CTGATGCGCC GACGCTGTTT TCCGGTGAGA TGTTCACGAA ACTCATCCTG 
GAACGGCTTG AGGAGGCGGA ACGGCTCGAG GAAGCGTTCG ATCTCTACCA GGAAGGGCAC 
ACCGGCCGAG CAAGCTACCG TATCGACGGG TATGCAATCG ACGAGGACCG CGAGGTTCTC 
GAGCTTTTCA CGACGATCCA CACCGGCGAA ATTCCGCCAG TGAGGCTGCC GATGGCGGAC 
GTGCGAAACG CGTTCGAGCG CGCATTGAGG TTTGCTCGTG CATCGATGGA CGGGCTGGCT 
GACAAGCTTG AACCTTCGAA CACTGATGCG AGCGATCTTG CGAGGAGGAT TGAGCGCGAG 
GCATCCCGGA TCTCGACGAT CAGGCTTACG CTGCTCACGG ATCAGCTGAC AGGTCCAGCA 
CTGCCAGAGA ACGAAGAGTG GTCTGGGCGG GTGATCGAAC ATGATGCCTT CGATATCGCC 
CGCCTGCACC GGATCCTTGG TGAGGGCGAG ACCCGATCAG ATATTGCCGT CGATCTCAGG 
CACCTTGCGG GTCGCTGCCT GCCATGCCTT CCGGTCAGGC CCGAAGCGGG GGGCTACGAA 
GCCTATCTTA CGGTGCTTCC GGGGGAAGTT CTTTCAAGCA TCTATCAGTC CTATGGGGTC 
AGGCTGCTTG AACTCAATGT TCGCGCCTTT CTGGGCATAC AGGGTCGCAA GAGCGTCAAC 
GCGGAACTTC GAAAGACGAT ATCCGATCAG CCATCGATGT TCATGGCCTT CAATAATGGT 
CTTGTCGCGA CCGTCGACGA AATCGTGTTC GAGAATGATC AGCAGGGACA GACACTCATT 
TCCGGTCTAA AGGGCCTCCA GATCGTCAAC GGCGGCCAGA CCACGGCTTC GCTCCATCGG 
GCAAGATTCA AGGATCGACT GTCGCTCCAG GGCGTTGAAG TCCCGGTGAA GATCATCAAG 
GTTACCGATG GTGATCTGGC AGAGATGGTT AGCTCCGTTT CACGCGCAGC GAATCGGCAG 
AATACCGTCC AGCAGGCCGA CTTCTCGTCA AATGACCCCT TTCATCAGCG CGTTGAAGAA 
CTTGCGAACA ATACGTGGCT TGAAAGTGGC AAGGGCCGCT GGTTCTACGA GCGCGCCCGC 
GGCTCCTATC TGGCGGCCGA GCAGAAGGCG TCCTATCGTG CGCGCGACGA CAAGATCTTT 
CGGATCCACA CCCCGCGCAC GCGGCGCCTC AGTAAACTTG ATCTGGCGCG CTATCTGAAT 
GCCTGGGGCG ACCTTCCCTT CCGGGTCTGC CTTGGCGGAC AGAAGAACTT TCAACATTTC 
ATGCAGCGCC TCAAGGACAG GTCGGCTCCG CTGCCCGACG AAGCCTGGTT CCGGCGCCTT 
GTAGCAATCG GCGTCATCTA CAGGGCGTCT GAACGGGTCG TGCGGCAGAT GGGGTTTCCG 
GCGTTCCGTT CGCAGATCGT TGCCTATCTT GTCGCTTCGC TCTCGTTGCG GACAGGTGGA 
AGGGTCGATT TCGAAACTAT CTGGCGTCGG CAGGCGATCT CTGTTGAACT GGAAGATCTT 
CTCCGTTCCT GGGCACCGCA CGTCAACGAC GTCCTTCGCT CCACTGCTGG TGAACGAAAC 
CCGGGCGAGT GGTTCAAGCG GGAGGAATGC TGGCACGCTT TCAGAGACAA CCCTCCCCAG 
CTGTCGGACC CGATGCCGCC CGAGCTCGCC CATTCTTCTG CCGAACTTGG CCAATCTCTG 
GGCCGCGCCT TGTCACAGGC GCAGACGTTC ACGTCCGAAG ATCTTGAGCG GATACAGGAC 
TGCATGGTGA TCGACAGTGC GACCTTGCTG CAGGCCGCGG AGCTTGGCCA GCGACACCGG 
GTTCTCCACT GGAAGACCGC TGGCATCCTG AGAACAATTG CCGGCTATGC GGCTGGCGGC 
TGGGAGAAGA AGCCGTCGGC AAAGCAGGCG AAGTTTGCAC TGGAGGCTCT CAGATCGGTA 
CAGGATGCCG GGCTTCTTGG AGCTGGCAGT TCTGAGAGAG GGGAGGCCAG AGGGCAATGA 

 

Protein sequence

MTEDPLNTFA TELASEIEEI VIGADAPTLF SGEMFTKLIL ERLEEAERLE EAFDLYQEGH 
TGRASYRIDG YAIDEDREVL ELFTTIHTGE IPPVRLPMAD VRNAFERALR FARASMDGLA 
DKLEPSNTDA SDLARRIERE ASRISTIRLT LLTDQLTGPA LPENEEWSGR VIEHDAFDIA 
RLHRILGEGE TRSDIAVDLR HLAGRCLPCL PVRPEAGGYE AYLTVLPGEV LSSIYQSYGV 
RLLELNVRAF LGIQGRKSVN AELRKTISDQ PSMFMAFNNG LVATVDEIVF ENDQQGQTLI 
SGLKGLQIVN GGQTTASLHR ARFKDRLSLQ GVEVPVKIIK VTDGDLAEMV SSVSRAANRQ 
NTVQQADFSS NDPFHQRVEE LANNTWLESG KGRWFYERAR GSYLAAEQKA SYRARDDKIF 
RIHTPRTRRL SKLDLARYLN AWGDLPFRVC LGGQKNFQHF MQRLKDRSAP LPDEAWFRRL 
VAIGVIYRAS ERVVRQMGFP AFRSQIVAYL VASLSLRTGG RVDFETIWRR QAISVELEDL 
LRSWAPHVND VLRSTAGERN PGEWFKREEC WHAFRDNPPQ LSDPMPPELA HSSAELGQSL 
GRALSQAQTF TSEDLERIQD CMVIDSATLL QAAELGQRHR VLHWKTAGIL RTIAGYAAGG 
WEKKPSAKQA KFALEALRSV QDAGLLGAGS SERGEARGQ