Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2743 |
Symbol | |
ID | 7388397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2279501 |
End bp | 2280985 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643651800 |
Product | hypothetical protein |
Protein accession | YP_002549986 |
Protein GI | 222149029 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.128363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCTA TCGAGATACC GCCGCATGCA GGCGCGCTGC TGAAATCACT GCGCGGTCTC GGCTATTCAC CTGAGACCGC CCTCGCCGAT CTGATCGACA ACTCGATTTC CGCCGGAGCG GATCATGTTG AGCTCAGCAT AGACTGGAAC GAGGGAAATC CTCGCATCGG GTTGCTCGAC GACGGCCTGG GGATGACCCG TGGTGAGCTC GAAGATGCCA TGCGTTTCGG GGGCGACATG GACATTGAAC GAGGGCCGGA CGATCTTGGC CGTTTTGGTC TCGGCATGAA GACAGCCTCC CTGTCGCAAT GCCAGCGACT GACCGTAGTG AGCCGGAAGG CTGGGCACGA GTGCAGCATG TGCTGGGATG TCGCCAAGGT GGTCGCTTCC AGGACCTGGA GCGTCGACAT GGACACGCGC CCAGATCCCT TCGATCATCT GAGCATCCCT TCACATGGAG ATGGCACTCT TATCGCACTC GAACGAATGG ATGAGCTCGG AGGCCTGTTT GGCCTGGACA AGGAAGGGTT CTTCGCCAAG GTCCGCGACG TCCGTGATCA TTTTGCAATG GTGTTCCATC GCTTTCTCGA CGGTGATGCA CGCCGCGTCC GCATCACCAT CAATGGAAGG GCGGTTGTCG GATGGGACCC GATGCTGCGC ACACATCCCG CCACGCGCTC GCTTGGAGCA GGTCAGATGG GGTCTGGAGC ACTGGCGGTA CGGGTATCGC CTTTTGTGAT GCCGCATCGC GACAGGTTTG CCAATGAAGC CGAATTCGCG GCTGGTGGTG GTCCTGGCGG CTGGGCAGAA CGTCAGGGCT TCTATGTTTA TCGTGCCAGT CGGCTTGTCG TCGCCGGCAG CTGGCTTGGT CTCGGCGGTC ATCGTGAGTG GACGAAGGAT GAGAGCAGTC GCCTGGCGCG GATCACCATA GACCTGCCGC AGAGCGCAGA TTCCCAGTGG CGCATCGACG TCCGCAAGGC CCGCGCACGG CCGCCAGCGG CGTTGCGCGC TCGTCTGTCT GCGCTGGGCG GACAGTGCCG GGAACGAGCC CGTGAGGTCT TTGCCTGGCG CGGTGGGCAG GTCTGGGCTC CGGCGCAGAG AAAGGATGCG GAGACAGCAA TCTGGAACGA GGAGCACCGC TCGGGGAAGC GGCGATACCG GATCAATCGC GAACATCCGG TGATCGCTCA GCTGCTCAGT TCTGATGCGG CTACAAAGCG GCTGATGCGC ACCGCCATCA CCCTGATTGA ACGTTCGGTT CCGGTCGAGC GAATCTGGCT GGACATCTCG GAGAATGTCG AGGCTGCCAG CAGTCCGGAA GCCATTGACG CTCTTCTGAT CGATGATCTT GTCACCGCCA TTCGCAATAC GCGCGGAAGT CGCAGCACCG AGGAAGTTCT CGACACTCTG CTCCGCTCGC TGCGCCTCGA TGGCCCTGAC CTGAGGAAGG CCATTCTGGC AAGGCTGGAA TCGACCGATG AGTGA
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Protein sequence | MTSIEIPPHA GALLKSLRGL GYSPETALAD LIDNSISAGA DHVELSIDWN EGNPRIGLLD DGLGMTRGEL EDAMRFGGDM DIERGPDDLG RFGLGMKTAS LSQCQRLTVV SRKAGHECSM CWDVAKVVAS RTWSVDMDTR PDPFDHLSIP SHGDGTLIAL ERMDELGGLF GLDKEGFFAK VRDVRDHFAM VFHRFLDGDA RRVRITINGR AVVGWDPMLR THPATRSLGA GQMGSGALAV RVSPFVMPHR DRFANEAEFA AGGGPGGWAE RQGFYVYRAS RLVVAGSWLG LGGHREWTKD ESSRLARITI DLPQSADSQW RIDVRKARAR PPAALRARLS ALGGQCRERA REVFAWRGGQ VWAPAQRKDA ETAIWNEEHR SGKRRYRINR EHPVIAQLLS SDAATKRLMR TAITLIERSV PVERIWLDIS ENVEAASSPE AIDALLIDDL VTAIRNTRGS RSTEEVLDTL LRSLRLDGPD LRKAILARLE STDE
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