| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2727 |
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| Symbol | |
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| ID | 7388382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2258182 |
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| End bp | 2260821 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651785 |
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| Product | dimethylglycine dehydrogenase |
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| Protein accession | YP_002549971 |
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| Protein GI | 222149014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATGT CGCAAACGGG CGGCACAGGG AAGCGGGTCT TTATCATAGT CGCGGGATCA
ATCTTGCGGC GTCATCCGGT CGTTTGCGCC TTGCGCTCGC AGCAGAACAG GGGAAATTCC
ATGTCGATCA AATCTCATGC ACGGGCCGTG GTGATCGGTG GTGGCGTCGT CGGCGTTTCC
ACGCTCTATC ACTTGGCCAG GAAGGGCTGG AGCGATAGCG TGCTGATCGA GCGCAAGGAG
CTGACCTCAG GCTCGACATG GCATGCCGCC GGTCTGCTGC CGCTGTTCAA CATGAGCTAT
TCGGTCGGCC AGATCCACAA ATACTCGGTG AAGTTCTATC AGGAGCTTCA GGAAGAAACC
GGCATGAATG TCGGTTTCAG CAAGGTCTCC AATATTCGTC TCGCCCGCAG CAAGGATCGC
TGGGACGAGT TTATGTATTA CGCCGGGATT GCCGAAACCA TCGGCGTCAA GGTCAACATC
CTGACGCCTG AACAGGTCAA GGAGATCTGG CCGCTGTGTG AAACGGAAGG CTTGCTCGGC
GCCATCCAAC ATCCCGACGA CGGTTACATC CAGCCCGCCG ACCTGACCCA GGCGCTGGCC
AAGGGTGCCC GCGACCGTGG TGCCACAATT TACCGCAACA CCACCGTAAC CGCGATCGAG
CAACAGCCGG ACGGCTTGTG GAAGATCACC ACCGACAAGG GGGAGATCAC AGCCGAACAC
GTAATCTCCT GCACCGGCAA TTTTGCCCGC AAGACCGGCG AAATGGTGGG CATCAATATT
CCGGTCATTC CGGTTGAGCA CCAGTATATC GTCACCGAGC CGCATCCGGC CATTGTTGAA
CGCAAGGCCA AGGGCCTGCC GGAAATGGGC GTGCTGCGCG AGGCCGACAG CGCCTGGTAC
ATGCGCGAGG AAAATGGTGG CCTGTTGCTT GGGCCTTACG AAGTGGGCGC GCCGGTCTGT
TATGTCGATG GCCCGTCCGA TGAGAGTGAA TACGAGCTGT TCCAGGAAGA ACTCGACCGG
CTGATGCCGC ATATCGAGAC GGCCATGGTG CGGGTGCCGG CCTTTGGCGA AGTCGGCATC
AAGAAAGTCT ATAACGGCGC CATCGCCTAT ACGCCGGACG GAAATCCAAT TGTCGGTCCG
GCGCCGGGAT TGAAGAATTT CTGGCTGAAC GAGGGCCATT CCTTTGGCAT TACCGCTGCT
GGCGGTGCAG GCTGGCAATT GGCGGAATGG ATCGTCGATG GCGAATCCAC CCTCGACATG
ATGGGTGCCG ATCCGCGCCG CTTTGGTCCT TATGCGACAG AAGGCTATCT GATCGCCAAG
AACGAAGAAG CCTATGCCAA TGTCTTCACC ATGCATTACC CGGATGAGGA GCGCGCTGCC
GCCCGTCCGT TAAAAACCAC GCCGGTCTAT GACCGGTTGA AGAAGATGGG TGCCGTCTTC
GGCTCCGTCT ATGGTTGGGA GCGTGCCAAC TGGTTTGCGC CCGAAGGCTA TGAAGTGCCA
AAGAACGAGC TTGGTGTTGG CGTCGATGTC ATCACCAATC ACAATTATGC AGCCCCGACC
GAAGATGGCC GGGTGGTGGA AAAATGGTCG TTCCGCCGCT CAAACTATTT CGAGCATGTT
GGCAATGAGG TGAAGCATGT CAACGAGCAT GTCGGCGTGC TCGACATGTC GGCCTTCGCA
AAGATGGAAG TGTCCGGTCC CGGCGCACGG GCCTGGCTGG ACAGCCTGTT TGCCAATGCC
ATCCCGAAGA AGCGTGGCCG TATCGCGCTG TGCCACATGC TGACCCAGCA TGGCGGTGTC
CGTGCTGAAT TCACGGTTTA TGAATGGGCT CCGAACCGGT TCTATCTGGT GTCGGCTGGC
GCTTACGAGG CCCATGACCA TGATTATCTG CGCAAGCTGG CTCCAACTGA TGGGTCGGTC
AAGCTTCAGC AGATCACCCA GAAGCTCGGC GTGCTGGTTC TGGCCGGGCC AAAGTCGCGG
CAGGTCTTGC AGAAACTGAC CCGTACCAGC CTTGATAACA AGGATTTCCC CTGGCTGACC
GGCAAGGAAA TCTCGGTTGG CGTGGCGAGT GCCCATGCAT TGCGCGTCAA TTTTGTCGGG
GAACTGGGTT GGGAATTGCA TCACCCCATC GAGATGCAGG CCTACATTTT TGACAAGCTG
ATGGAGGCCG GTGCCGAATT CGACATCAAG CCTTTCGGAA TCCGCGCCAT GCTGTCGATG
TCGGTCGAGA AATCCTATCG CCTGATCCCG AGGGAAATGT CGATCGAATA CAACGCCTAT
GAATCGGCGC TCGACCGTTT CATCAAGCTC GATAAGGACT TTATCGGCAA GGAGGCTCTG
GTTGCCTATA AGGAAAAGGG TCTGAAATGG AATTTCGCCA CCCTGGTTGT CGAAGGTGTG
GCGGATGTCG ATGCTCGCGG CTCGGAAGCG ATCTACAATG AAACGGGCGA TCTGGTCGGG
CGTGCAACCA ATGGCACCTA TGGATGGCGC ATCGGCAAAT CCATCGCGCT CGCCATGCTG
CAACCCGGCT ATGCAACTGA AGGCACCAAG CTGAAGATCA AGATCCTCGG CGATCTCTAT
GACGCGGTGG TTGTGGGCGA AAGCCCGTTC GATCCTGATA ATGCCGCTCT CAGGGCTTGA
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| Protein sequence | MPMSQTGGTG KRVFIIVAGS ILRRHPVVCA LRSQQNRGNS MSIKSHARAV VIGGGVVGVS
TLYHLARKGW SDSVLIERKE LTSGSTWHAA GLLPLFNMSY SVGQIHKYSV KFYQELQEET
GMNVGFSKVS NIRLARSKDR WDEFMYYAGI AETIGVKVNI LTPEQVKEIW PLCETEGLLG
AIQHPDDGYI QPADLTQALA KGARDRGATI YRNTTVTAIE QQPDGLWKIT TDKGEITAEH
VISCTGNFAR KTGEMVGINI PVIPVEHQYI VTEPHPAIVE RKAKGLPEMG VLREADSAWY
MREENGGLLL GPYEVGAPVC YVDGPSDESE YELFQEELDR LMPHIETAMV RVPAFGEVGI
KKVYNGAIAY TPDGNPIVGP APGLKNFWLN EGHSFGITAA GGAGWQLAEW IVDGESTLDM
MGADPRRFGP YATEGYLIAK NEEAYANVFT MHYPDEERAA ARPLKTTPVY DRLKKMGAVF
GSVYGWERAN WFAPEGYEVP KNELGVGVDV ITNHNYAAPT EDGRVVEKWS FRRSNYFEHV
GNEVKHVNEH VGVLDMSAFA KMEVSGPGAR AWLDSLFANA IPKKRGRIAL CHMLTQHGGV
RAEFTVYEWA PNRFYLVSAG AYEAHDHDYL RKLAPTDGSV KLQQITQKLG VLVLAGPKSR
QVLQKLTRTS LDNKDFPWLT GKEISVGVAS AHALRVNFVG ELGWELHHPI EMQAYIFDKL
MEAGAEFDIK PFGIRAMLSM SVEKSYRLIP REMSIEYNAY ESALDRFIKL DKDFIGKEAL
VAYKEKGLKW NFATLVVEGV ADVDARGSEA IYNETGDLVG RATNGTYGWR IGKSIALAML
QPGYATEGTK LKIKILGDLY DAVVVGESPF DPDNAALRA
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