| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2700 |
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| Symbol | accA |
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| ID | 7388362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2237638 |
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| End bp | 2239203 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651763 |
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| Product | ABC transporter substrate binding protein (agrocinopine) |
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| Protein accession | YP_002549950 |
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| Protein GI | 222148993 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAGG CCAACCGTAG AAAATTCATG ATCGGCGCAA GCGTCGCGGC GCTTGCCTCG
ACCGCAAGTG CCAGATTCGC CTTCTCTGCC GAGCGCCGCG CGTTGAAGAT CGGCGTCAAC
GGCATTCCGG TTACGTTGGA GCCGATCAAC GCCATCAGCA ATGTCGGTCC CCGCATCGTC
AACCAGATTT TCGATACGCT TGTCGTGCGC GATTTCTTCA GCAATGGCGC GCCGGGCAAC
GGCATCAATC TGATGCCCTC GCTGGCCGAG AGCTGGGAAC GGATCGACGA CAAATCGGTG
CGCTTCAAGC TGCGCCAGAA GGTGATGTTT CACGATGGCG TCGAAATGAC CGCAGACGAC
GTCGCCTACA CCTTCTCTTC GGAACGTCTC TGGGGGCCAG ACGCGATCAA GGTGATCCCG
CTCGGCGGTT CTTACGCGCT TGATTTCGAC GAACCGGTTG TCGAGGACAA GTACACTGTG
GTCATCCGCA CAAAGACCCC GACGCCCCTG ACCGAGTCCT ACATGGCATC CTGGATGGGT
CGCATCGTTC CCAAGGCATA TTACAAGACG CTTGGAACGG CCGCTTTTGG TAACAAACCG
GTTGGAACGG GTCCTTACAA GTTCGTCGAG TTCGTTGCCA ATGACCGCGT TGTCATCGAA
GCCAACGACG CCTATTGGGG TCTGAAGCCG ACAGCATCTA AAATCACGTA CCAACTTGTT
GCCGAACCCG CAACGCGCGT CGCCGGCCTG ATCAGCGGCG AATACGATAT CGTCACGACG
TTGACGCCGG ACGATATGGC GTTGATCAAC AGCTATCCCG ACTTGGAGAC GCGTGGGAAT
ATCGTCGAAA ACTTCCACAT GTTCACCTTC AACATGAACC AGCCCGTCTT CCAGTCGAAA
CCGCTTCGCC GCGCCTTGGC GCTTGCGGTC AATCGTCCAC TGATCGTTCA GTCACTCTGG
ATGAACAAGG CGACGATTCC GAATGGCTTC AACTTCCCGA ACTACGGCAA GACCTTCGAT
CCGAACCGTC GCGCCATGGA ATACAATATC GAGGAGGCCA AGCGCCTGGT GAAGGAAAGC
GGTTACGACG GTACGCCGAT CACCTACCAT ACGATGGGCA ACTATTATGC AAACGCCGTT
CCCGCCTTGA TGATGATGAT CGAGATGTGG AAGCAGATCG GCGTGACCGT GGTGCCGAAG
GTCTATGCAC CGGGCGGCGC ACCGAAGGAT CAGGACAGCT ATATGCGCAA CTGGTCCAAC
GGCCAGTGGA TGACGGATGC CTGGGCGACG ATGATCTGCG AATTCGGACC CAAGGGCCAG
GTTCAGAAGC GTTGGGGCTG GAAGGCGCCT GCGGAGTTCA ACGATTTGTG CACGAAGGTA
TCGCAAATAC CTGACAGCAA GGAGCGTTTC GACGCCTTCA ACCGCCTCCG TGACATCTTC
GAAGAGGAAG CGCCGGCCGT GATCCTCTAC CAGCCCTTCG ATGTCTATGC CGCACGCAAG
GACGTTCACT GGAGGCCAAT CAGCTTTGAG ATGATGGAAT TCCGCAACAA CCTTGCTTTC
GGCTGA
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| Protein sequence | MLKANRRKFM IGASVAALAS TASARFAFSA ERRALKIGVN GIPVTLEPIN AISNVGPRIV
NQIFDTLVVR DFFSNGAPGN GINLMPSLAE SWERIDDKSV RFKLRQKVMF HDGVEMTADD
VAYTFSSERL WGPDAIKVIP LGGSYALDFD EPVVEDKYTV VIRTKTPTPL TESYMASWMG
RIVPKAYYKT LGTAAFGNKP VGTGPYKFVE FVANDRVVIE ANDAYWGLKP TASKITYQLV
AEPATRVAGL ISGEYDIVTT LTPDDMALIN SYPDLETRGN IVENFHMFTF NMNQPVFQSK
PLRRALALAV NRPLIVQSLW MNKATIPNGF NFPNYGKTFD PNRRAMEYNI EEAKRLVKES
GYDGTPITYH TMGNYYANAV PALMMMIEMW KQIGVTVVPK VYAPGGAPKD QDSYMRNWSN
GQWMTDAWAT MICEFGPKGQ VQKRWGWKAP AEFNDLCTKV SQIPDSKERF DAFNRLRDIF
EEEAPAVILY QPFDVYAARK DVHWRPISFE MMEFRNNLAF G
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