| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2697 |
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| Symbol | accD |
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| ID | 7388359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2234675 |
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| End bp | 2235592 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651760 |
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| Product | ABC transporter membrane spanning protein (agrocinopine) |
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| Protein accession | YP_002549947 |
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| Protein GI | 222148990 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACGGCCT TTATCCTTGC CCGTCTGGTT CGAGCCATCG CGGTGCTCAT CTTCACCGTC
ACGCTCGTCT TTATCGTTCT GCGCCTGAGC GGAGATCCAG CCCAGCAGAT GCTCGGCGAC
GATGTCGGTC CTGCGGCGGT TGCCGCGTTC AATGCCAAAT GGGGTCTGGA TCGGTCGCTT
CCAGAACAAT ATGCCTATTA TGTCGCAAAC GCCGCGCGCG GTGATTTCGG CATCTCCTTT
GGCGATGGAC GGCAGGTCTT CGACATTGTT GCGGAACGGA TACCAAAGAC GTTGATGCTC
ACGGTGCCAG CCTTGCTGCT CAGCATGCTG ATCGGCATTC CCGCCGGCAT TCTGGCCGCG
ATCCGGCGCG AATCCGCGCT CGACAAGGGT GTCATGGCAG GTGCCGTCCT GGGCTATAGC
GTTCCCAACT TTCTGCTTGG CCTTGTCTTC ATCTTTGTCT TTGCCGTCTG GCTGCGTGTG
CTGCCAAGTT CGGGCAGTTC GACATTAAAC CATTCGATCC TGCCGATCGC GACCTTTGCA
TTGTTCAACG CTGCGGCCGT TGCGCGTTTC ATGCGCTCGA CGCTGCTCGA CGTGCTGGGG
CAGCCCTATA TCGCGGCTGC GCGTGCCGAC GGGGCGCCTG ACTGGGAGAT TATCTTGTGG
CACGCGCTGC CGAATGCGGC GATCCCCATG GTCACCACGC TGGGCTTTAT CGCGGGTGGC
ATGATGGGAG GGGCGGCACT GATCGAACCC GTCTTTGCAT GGCCAGGACT CGGCATCGGC
TTTGTAAGGG CCACGGCCAC CGGCGATCTG CCGGTAGTCC AGGCGATGAT CATTCTGTTC
ACGGTCTTCA TGGTGTCGAT CAATCTGACT GTTGACATTC TCTATGGCCT GCTCAACCCC
AAGATCAGGA AGCCGTGA
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| Protein sequence | MTAFILARLV RAIAVLIFTV TLVFIVLRLS GDPAQQMLGD DVGPAAVAAF NAKWGLDRSL
PEQYAYYVAN AARGDFGISF GDGRQVFDIV AERIPKTLML TVPALLLSML IGIPAGILAA
IRRESALDKG VMAGAVLGYS VPNFLLGLVF IFVFAVWLRV LPSSGSSTLN HSILPIATFA
LFNAAAVARF MRSTLLDVLG QPYIAAARAD GAPDWEIILW HALPNAAIPM VTTLGFIAGG
MMGGAALIEP VFAWPGLGIG FVRATATGDL PVVQAMIILF TVFMVSINLT VDILYGLLNP
KIRKP
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