| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2622 |
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| Symbol | cobC |
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| ID | 7386623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2169307 |
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| End bp | 2170320 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643651703 |
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| Product | cobalamin biosynthetic protein |
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| Protein accession | YP_002549890 |
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| Protein GI | 222148933 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0228702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTAC AGCCCGGCCA GACCATTGCC CATGGCGGCG GCCTTGCTGC GGCAGCGCGC
CTTTATGGCG GAAACATTGA AGACTGGCTG GACCTGTCCA CCGGCATCAA TCCCTGTCCC
CCTGATCTGC CCGCCATCGA TGCCCGCGCC TGGCACCGCC TGCCGGACCG CGAACGCGAG
GACGCAGCCC GGCTTGCGGC GCGCGATTTT TACGGCAGCG GGACCGTTTT GCCGCTGCCG
GTTCCAGGCA CACAATCGGT TATCCAACTG TTGCCGAAGT TGATGGATGC AGGCAGGCGC
GCCGTCATTC TCAGCCCGAC CTACGGCGAA TATGCCCGTA GCCTCACGCT GGCCGGTATT
GCTGTCGATG CGGTGGACAG TCTTGAGGAA ATAACATCCG TCCATGGACT GGCGGTGGTG
GTGAACCCCA ATAATCCGAC CGGGCGGCAG ATCGGAAGAT CGGAACTGGG CGCGGTTGCC
CAGCGCATGG CGTCCCATGG CGGCCTCTTG CTGGTGGACG AAGCCTTTGC CGATGTGCAG
CCGGAGCAAT CTCTTGCGCC GCTGGTGGCG GATCATCCCA ATCTGCTGCT GTTTCGTTCC
TTCGGCAAAT TCTTCGGTCT GGCGGGCTTG AGGCTGGGTT TTGTGATTGC TGATCAGGCG
CTTTTGGATC TGTTTGCCGA GTGGCTAGGG CCTTGGGCGG TATCGGGACC GGCTCTGTCG
GTGGCAACGC AGCTTTTCAG CGCTGACCAT CGTGGCTTGC GTGCTCAGAT CTTTGCCCGC
AAGGCAGCGC TTGAAGCGGT TTTGGCGCAG GCAGGTTTGG CGGTGATTGG CGGCACGCCG
CTGTTTTCAC TGGTGGAATA CACGGGTGCG GCCAACTTGC ATGCCCATCT GGCACGCGTG
CATATCCTGA CGCGGATTTT TGAGTATGCG CCGGGCTGGT TGCGGATTGG CCTGACGCCC
GACGAAGAGG CCGATGCCCG GCTTCTGGCT GCCTTGCAGG CCTTCCAGTC ATGA
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| Protein sequence | MTVQPGQTIA HGGGLAAAAR LYGGNIEDWL DLSTGINPCP PDLPAIDARA WHRLPDRERE
DAARLAARDF YGSGTVLPLP VPGTQSVIQL LPKLMDAGRR AVILSPTYGE YARSLTLAGI
AVDAVDSLEE ITSVHGLAVV VNPNNPTGRQ IGRSELGAVA QRMASHGGLL LVDEAFADVQ
PEQSLAPLVA DHPNLLLFRS FGKFFGLAGL RLGFVIADQA LLDLFAEWLG PWAVSGPALS
VATQLFSADH RGLRAQIFAR KAALEAVLAQ AGLAVIGGTP LFSLVEYTGA ANLHAHLARV
HILTRIFEYA PGWLRIGLTP DEEADARLLA ALQAFQS
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