| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2621 |
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| Symbol | cobD |
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| ID | 7386622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2168339 |
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| End bp | 2169310 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651702 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_002549889 |
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| Protein GI | 222148932 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.246707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAG CGCATCTGCT TATCTTAGCT CTGGCGCTGG TGCTTGACCG CGTGGTTGGC
GATCCGCCCT GGCTATGGGC GCGCCTGCCG CATCCGGTCG TGGTGTTTGG CACATGTATT
TCGGCCTTCG ACCGGCTGCT GAACCGGCCT GCTCTGGCCG ATCCGCTGCG CAAGGCGGGC
GGGGTGTTGA CGATTGTGCT TCTGCTGATG GCAAGCCTTG GCGTTGGATA TGGGCTGCAT
CGCCTGTTCG CGGCACTTGG CTTTATCGGG TTCCTGCTGG AAATTGCTGT CACGGCAGTG
TTTCTGGCGC AGAAAAGTCT GCTGGACCAT GTGAAGGCCG TCGCCGACGG CTTGTTGCAT
GAGGGCCTCG CCGGTGGTCG CCGGGCGGTG TCGATGATTG TCGGGCGCGA TCCCGATGTG
CTTGATGAGG CCGGTGTGGC GCGTGCCGCG CTGGAAAGCC TGTCAGAAAA CTTTGCCGAT
GGGGTGGTGG CACCCGCCTT CTGGTATGGC GTGCTCGGTC TGCCGGGTCT GCTTGCCTAT
AAAATGCTGA ACACTGCCGA TTCGATGATT GGCCATAAAT CCGAACGCTA TGTGCAATTC
GGCTGGGCTT CTGCACGGCT GGACGATTTG GCCAATTGGC CCGCTGCCCG GCTGGCGGGA
TTGTTGATCG TCTGTGCTGC CGGCACTGGT GAGGGTATAG CGACGGCTAA AAGGTGCTTC
ACGGTGATGA TGGCTGATCA CGGCCTGCAT CGCTCGCCCA ATTCCGGCTG GCCGGAAGCG
GCGGCGGCGG GTGGGCTGGA TGTGGCGCTG GCGGGACCGC GTATATATGC CGGAGACGTG
GTCAACGAGC CAATGATGAA TGCCGCGGGC CAACGCGCCA TTGGTGGTGC GGATATCCGG
CGCGGTCTTT TGCTGATTGA CGGAGCCTGG CGCATCGGTG TTGGCATTTT GCTACTGCTG
ACCCTGTTGT GA
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| Protein sequence | MMEAHLLILA LALVLDRVVG DPPWLWARLP HPVVVFGTCI SAFDRLLNRP ALADPLRKAG
GVLTIVLLLM ASLGVGYGLH RLFAALGFIG FLLEIAVTAV FLAQKSLLDH VKAVADGLLH
EGLAGGRRAV SMIVGRDPDV LDEAGVARAA LESLSENFAD GVVAPAFWYG VLGLPGLLAY
KMLNTADSMI GHKSERYVQF GWASARLDDL ANWPAARLAG LLIVCAAGTG EGIATAKRCF
TVMMADHGLH RSPNSGWPEA AAAGGLDVAL AGPRIYAGDV VNEPMMNAAG QRAIGGADIR
RGLLLIDGAW RIGVGILLLL TLL
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