| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2598 |
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| Symbol | sipf |
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| ID | 7386606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2146046 |
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| End bp | 2146999 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643651685 |
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| Product | prokaryotic type I signal peptidase |
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| Protein accession | YP_002549873 |
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| Protein GI | 222148916 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0681] Signal peptidase I |
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| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATTTG TTTCTGCCTT TCGCAAGCGG AATCCGATAT GGGCTGCTGG TTTGGCTCTT
GTTCTTTCTC CAGCTATTGG CTGTTTTTAT CTTGGCAGAG GGCGATCAGG TCTTCTCTAT
ATGCTCGCCG ATGTTTTTAT CGGATATGTA TTTCCATTTG TGATGAAATA CCAAGGGATC
CAGCAGCACG AACTTATATT TACTCTTGTT GTTATTAGTT ATCGCTTGGG AGGTAGCTTC
CACGTTTATA TTGCGGCTTC ACGCCAGCCG CCTCTGGACC GCTATCCGTG GTTCGCGCGG
CTCCATAATT TGGCAATTGT CTTGATTGTT GTGCCACTTC TCAGCGCCTT CGCCATAAGA
AACCTTCTCA TTCAACCATT TTCCATTGTT TCTGGACCGA TGCTGCCGAC GCTTGAGGTT
GGGGATTATG TATTTTCCGA AAAGGTAACT TACGGAATGA GCCGGTATTC AATCATGCAA
GGATTAGGGC CATCGCCCCG TATTGGCGGA CGCTTGCCGC TGAGAGGCGA AGTCGTCATT
TTCATGCTTC CCTCTTATTC GGGCAACGAA TTAGTCAGTC GAGTCATTGG ATTACCCGGT
GACCGTATTC AAATGCGCAG CGGGCGGCTT TACATCAATG ACACTCTCGT TGATCGCCAA
CGGCTCGGGC AAGACGAAAC CCGACCAGGG TCGCCGGGAA CTTTGTATTT GGAGCGGTTG
CCAGGAGGGG CAGAACATCA GATCATCGAA ATGACAGATG AGTCAAAAGG AGACAATTCT
GCTGACTTTC TGGTCCCTGA CGGGCATTAT TTTATGATGG GAGATAACCG GGACAACAGT
AACGACAGTC GTTTTGATGT AGGCTTCGTT CCTGCAGAAA ACATAGCGTC GCGCCCTTTC
TTAATTCTCT TCAATTCCCA TTTGTTAAGC AGATCGTGGC TTCCGATAAC GTGA
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| Protein sequence | MKFVSAFRKR NPIWAAGLAL VLSPAIGCFY LGRGRSGLLY MLADVFIGYV FPFVMKYQGI
QQHELIFTLV VISYRLGGSF HVYIAASRQP PLDRYPWFAR LHNLAIVLIV VPLLSAFAIR
NLLIQPFSIV SGPMLPTLEV GDYVFSEKVT YGMSRYSIMQ GLGPSPRIGG RLPLRGEVVI
FMLPSYSGNE LVSRVIGLPG DRIQMRSGRL YINDTLVDRQ RLGQDETRPG SPGTLYLERL
PGGAEHQIIE MTDESKGDNS ADFLVPDGHY FMMGDNRDNS NDSRFDVGFV PAENIASRPF
LILFNSHLLS RSWLPIT
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