| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2594 |
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| Symbol | |
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| ID | 7386603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2143053 |
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| End bp | 2143682 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651682 |
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| Product | hydrolase |
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| Protein accession | YP_002549870 |
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| Protein GI | 222148913 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.537934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGG CAGTGCTTTT CGACATGGAC GGCGTTCTGA TCGATGCCAA GGAATGGCAT
TACGAGACGC TGAATGACGC GCTGGCGCTT CTCGGGCTCA ATATCAGCCG CACCGAACAT
CTCGCCGTCT ATGACGGCCT GCCAACACGC AAAAAACTGG AAATGCTGAC AAAGACGCGG
GGATTGCCGC CAAGGCTGCA CGATTTTCTC AACACGCTCA AACAGAAGAT GACCTATCAG
GTCATCGTCG AAAAATGCCA ACCGGTCTTT CATCACGAAT ACGCCCTCGC GCGCCTGAAG
CGGGAGGGCA AGCATATCGT GGTCTGCTCA AACTCCGTCA GGTCGAGCGT CGAGGCGATG
ATGCGCCAGG CTGACCTGTT GAAATACCTG GATTTCTTTC TATCCAATCA GGATGTCGGC
AAGGCGAAGC CCGATCCCGA AATCTACCTG ACGGCAATCG ACCGGCTGCA ATTGCAGCCG
GAGGAATGCC TGATCCTGGA AGATAACGAT CACGGCATAC AGGCCGCCCG CTCCTCAGGC
GCCCATGTGC TGGTGGTGGG ATCGACCAAC GACGTCACCT ATGAGCGTAT CATGAACGAA
ATCACCAAGA TCGAATCGGC CCTCACATGA
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| Protein sequence | MIKAVLFDMD GVLIDAKEWH YETLNDALAL LGLNISRTEH LAVYDGLPTR KKLEMLTKTR
GLPPRLHDFL NTLKQKMTYQ VIVEKCQPVF HHEYALARLK REGKHIVVCS NSVRSSVEAM
MRQADLLKYL DFFLSNQDVG KAKPDPEIYL TAIDRLQLQP EECLILEDND HGIQAARSSG
AHVLVVGSTN DVTYERIMNE ITKIESALT
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