| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2586 |
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| Symbol | |
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| ID | 7386598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2137979 |
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| End bp | 2138953 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651677 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002549865 |
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| Protein GI | 222148908 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTTTA TGTTGAGAAA AATTGATGGT TGTCCAATGA CCCTTTCCCA GTCTCCCTCC
ATGCCTTCCA CCGTTCTGGC AGCGGCCAGT TTGCCACTTC TGGATAATGA CGTGCTGCGC
ACCTTCGTGG CGATTTCCGA GGTCGGCAGT TTTACGGCTG CCGCAGACAT GGTGTTTCGC
ACCCCCTCGG CGGTATCGAT GCAGATCAAG AAGCTGGAGG ATCAACTGGG CGTCTCGCTG
TTTCGCCGTG ATGCCCGTTC CGTCACGTTG ACGCCGCATG GGGCTTTGCT GCTCAGCTAT
GCCAAGCGCA TCCTCGCCCT GAACAATGAG GCGGTGGCAC GGTTTTTGGC GCCCGAGATG
AATGGTGTGG TGCGGCTGGG ATCACCTGAT GATATCGGCG AACTGGTCCT GCCCGGTATT
CTCACTCATC TGGCGCGCAC ATGGCCGCAT CTGGCCATCG AGGTGACGAT TGCCGGTTCT
GTGGAGCTGC GCAAGGCGGT GAATGAGAAG CGGCTGGACG TAACACTGTT CAATTTTCTA
AACGGCATCG CCGCCGATCC CACCATGACA GTGATGAGCG AAAAGCTGGT CTGGGCCGGA
AAAAAACACG GTCAGGCCCA TCTGAAAACG CCGCTGCCGC TGTCTGTCTG GGATGAGAGC
TGTGTGTGGC GCAAGCGCGC CATGACCGAA TTGACCCGCC GGGGCAAGGA ATTCCGCATC
GCCTATTTCT GCGGTCACCA CGTCGGGCAA TATGCGGCGA TCCGGGCTGA TATCGCCGTC
GCGCCGCTTG CCCGCTTCCT GTTGCAGGAG GATATGGTGG AACTGACCGA GCGTGATGGA
TTGCCGGATC TTGGCAGTTA CGAGGTCGGC CTTGCCGTGT GTGAAGATGC CTCGCCGCCG
GTCAAGGCTG TTGCCGATTA CGTGCGTTGC GTGCTGGGAA ATCGCGGCTG TGTCGACACA
GCGGTGGCCG CCTGA
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| Protein sequence | MIFMLRKIDG CPMTLSQSPS MPSTVLAAAS LPLLDNDVLR TFVAISEVGS FTAAADMVFR
TPSAVSMQIK KLEDQLGVSL FRRDARSVTL TPHGALLLSY AKRILALNNE AVARFLAPEM
NGVVRLGSPD DIGELVLPGI LTHLARTWPH LAIEVTIAGS VELRKAVNEK RLDVTLFNFL
NGIAADPTMT VMSEKLVWAG KKHGQAHLKT PLPLSVWDES CVWRKRAMTE LTRRGKEFRI
AYFCGHHVGQ YAAIRADIAV APLARFLLQE DMVELTERDG LPDLGSYEVG LAVCEDASPP
VKAVADYVRC VLGNRGCVDT AVAA
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