| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2549 |
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| Symbol | metC |
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| ID | 7385905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2099360 |
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| End bp | 2100550 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651648 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_002549836 |
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| Protein GI | 222148879 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACA AAAAAGACTG GTTGACGAGC GCCGGCACCA ATACGAAATT GTGCCATATC
GGCCATGATC CCTCGAGCTA CCATGGTTTT GTCAATCCGC CGATCGTCAA GGCATCGACG
GTGCTGTTTC CGACTGCCGA AAGCATGGAA ACACGGACGC AGAAATATAC CTATGGCACC
CGCGGCACAC CGACGACGGA TGCGCTTTGC GATGCGATCG ACGTGTTGGA AGGGTCGGCT
GGAACGATTA TATTGCCCTC CGGCCTCGCT GCGATTACCG TCCCTTTCCT GGCCTTCCTA
TCGCCTGGCG ATCATGCGCT GATCGTTGAT TCGGTTTATG ACCCAGCCCG ACATTTCTGC
GATACGATGT TGAAGCGGAT GGGTGTCGAG GTTGAATACT ATGACCCTGC CATCGGCGCG
GGACTAGCAT CGCTGATGCG CGCCAATACA AAGCTGGTTC ACGCTGAGGC TCCCGGCAGC
AATACATTCG AAATGCAGGA TATTCGCCTT CTGGCTGATA TCGCTCATAG TCATGGCGCC
GTGGTCAGCA TGGACAATAC CTGGGCAACG CCGCTCTATT TCCGGCCACT GGATTTCGGT
GTCGATATTT CCATGCAGGC AGCAACGAAG TATCCGGCTG GCCATTCCGA CATCCTGATG
GGGACGGTTT CGGCCAATGC GGCCTGCTGG CCGCGTCTTA AGGCTGCCAA TGGCGCCATG
GGCCTCTGCG GTTCGGCAGA GGACAGTTAT ATGGTTCTGC GTGGTCTTAG AACCATGGCG
GTTCGGCTCG CCCATCATGA TCGCAGTGCT CGTACCGTTG CCGAATGGCT GGAGACGAGG
GACGATGTTG CGCGGGTCTT GCATCCGGCC CTGCCCAGTT TTCCCGGTCA TGACATCTGG
AAACGCGATT TTAAAGGCGC GTCGGGGATA TTTTCCTTTG TGCTGGCGGA AAGCGATCCG
GCGCAGTTCA AGCGCAAGGC GCATGCTTTT CTCGATGCCT TGCAGATTTT CGGCCTTGGA
TGGTCCTGGG GTGGTTACGA AAGCCTGGCG GTACTGGCCA ATGTCGGCGA CCGCGTTGTC
ACAAAACCGC CAACCGACGG GCCTTTGATT CGTCTTCAGA TCGGACTTGA AGATGTTGCC
GACCTTCAAG CGGACCTGGA GAGAGGATTC GCAGCGGCAG CTACTGTTTA A
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| Protein sequence | MSDKKDWLTS AGTNTKLCHI GHDPSSYHGF VNPPIVKAST VLFPTAESME TRTQKYTYGT
RGTPTTDALC DAIDVLEGSA GTIILPSGLA AITVPFLAFL SPGDHALIVD SVYDPARHFC
DTMLKRMGVE VEYYDPAIGA GLASLMRANT KLVHAEAPGS NTFEMQDIRL LADIAHSHGA
VVSMDNTWAT PLYFRPLDFG VDISMQAATK YPAGHSDILM GTVSANAACW PRLKAANGAM
GLCGSAEDSY MVLRGLRTMA VRLAHHDRSA RTVAEWLETR DDVARVLHPA LPSFPGHDIW
KRDFKGASGI FSFVLAESDP AQFKRKAHAF LDALQIFGLG WSWGGYESLA VLANVGDRVV
TKPPTDGPLI RLQIGLEDVA DLQADLERGF AAAATV
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