Gene Avi_2548 details

Gene Information

• Locus tag: Avi_2548
• Symbol: nah
• ID: 7385904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2098644
• End bp: 2099309
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643651647
• Product: salicylate hydroxylase
• Protein accession: YP_002549835
• Protein GI: 222148878
• COG category: [C] Energy production and conversion; [H] Coenzyme transport and metabolism
• COG ID: [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCTTCA GCGGCAGCAT TGCCTGGCGC GTCACTCTGC CTCAGGCTGA ATCGCCTGCC 
TTTCTCGACC GCCAGTCCGT AACGGCTTTT CTGGGACCGA ATGCCCATAT GGTCACCTAC 
CCCTTGCGCG ATACCGACAG TATCAACATT GTGGCCATCG GCGCGGGCGT CGATCCCGGC 
GAAGGATGGG CGGCACAAAC GCAAGAATCT CAAGCACTGC TGCTGGAGCG GGCCTTCAAA 
GGGTGGAATA GCGACATCCG CACCATGCTG GCGAATGCCA AGGGTAACAT GACCTTCTGG 
CCACTGTTTC AGGCTGGAAA TGGCCGTTGG CACAACGACA AAGATCTGGT GCTGATCGGT 
GATGCGGCCC ACGCCATGCT CCCCTTCTCG GCCCAGGGTG CCGCCATGGC CATTGAAGAC 
GCTTTCGAAC TGGCCGATTT CGTCTCCAGC CGGTCCATCC CCCAGGCGCT CGCGGCTTAT 
GAGGCGAGCC GGCAAAAACG GGTCAGTGCC GTGCGCAAAC GGGGGGCAAT CAACAAATTC 
GCCTATCACG CCAAGGGGCC GCTGCAAATC GGGCGCGACG TCCTCTTGTC CTTGCGGTCT 
TCCGATAGTT TCGCGCGCGA TCTCGACTGG CTCTATGGCT ACCGGCCTGT CTTGACAGAC 
CGGTAG 

 

Protein sequence

MSFSGSIAWR VTLPQAESPA FLDRQSVTAF LGPNAHMVTY PLRDTDSINI VAIGAGVDPG 
EGWAAQTQES QALLLERAFK GWNSDIRTML ANAKGNMTFW PLFQAGNGRW HNDKDLVLIG 
DAAHAMLPFS AQGAAMAIED AFELADFVSS RSIPQALAAY EASRQKRVSA VRKRGAINKF 
AYHAKGPLQI GRDVLLSLRS SDSFARDLDW LYGYRPVLTD R