| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2511 |
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| Symbol | lpxB |
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| ID | 7385876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2071675 |
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| End bp | 2072850 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651619 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_002549807 |
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| Protein GI | 222148850 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.749833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC GGCCCCTGAA GATCGCAGTC ATTGCTGGCG AAGTCTCTGG CGACTTGCTG
GGTGCGGATC TGATCGCGGC GCTGAAGCAG CGCTATGACG GAGAGATCAC GCTGATCGGC
GTCGGTGGAC CCGCGCTGGA GGCGCAGGGT CTGACCTCAC TGTTTGATTT TTCGGAATTG
TCGGTCATGG GCATTACCCA GGTTCTGGCA AAGCTGCCGC GTTTCCTGAC ATTGATCGGC
AGGACCGCCA AAGCGCTTGT ATCAGCCAAA CCGGATTTGC TGCTGATTGT TGATAGTCCT
GATTTCACCC ATCGTGTTGC GAAAAAGGTG AGGGCGGCCT GCCCGACCAT GCCGGTGGTC
AACTATGTCT GCCCGAGCGT CTGGGCGTGG AAGGAATACC GGGCCAAGGC CATGCTAGCC
TATGTCGATA GCGTTTTGGC CGTCCTGCCG TTCGAGCCCG CCGTGATGCA GCGTCTTGGC
GGGCCGGAAA CCCATTTTGT CGGGCATCGG CTGGTCACCA GCCCCGCCAT GCTCGCCTGC
CGGGCAGACC GGCTGCTGCG TCCGCTTCCT GCCGCAGAGG AGCCGAAAAC CATCATGCTG
CTGCCGGGGT CGCGGGGCGC GGAAATCTCG GCGCTCGCGC CGGTGTTTCG GGATGCAGCC
CGGATTTTCG TCGAGCGCAA TGGGCCGACG CGGTTTGTGC TGCCAACGGT ACCACGGCGG
GAGCGTCAGG TGCGCGAGGC TGTTGCCAAT TGGGAGGAAA AGCCAGATGT GGTCGTTGGG
GAGGACGCCA AGTGGCGGGC CTTTGCCGAA TCGGATGCGG CCATCGCTGC TTCAGGAACG
GTATTGCTGG AGCTTTGCCT GGCTGGCGTG CCTGTCGTCT CCACCTATAA GACCGATTGG
CTGATCAAGC TGCTGCATAG CCGGATCAAG ACCTGGACTG GCGCCTTGCC GAGCATCATC
GCTGATTATG TCGTGGTGCC GGAATATCTG AACGAGCAAT TGCGCGGCGC ATCGCTGGCC
CGCTGGATGG AGCGACTATC CACCGAGACG CGGGAGCGGC AAGCCATGGT GGAGGGCTTC
GATCTGGTCT GGCAGAAAAT GCAGACAAAA ACCCCCGCGG GTGAAGCGGG GGCGGAGATC
GTGCTGGATG TTTTGAAGAC CCGCTCAATT GTATGA
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| Protein sequence | MENRPLKIAV IAGEVSGDLL GADLIAALKQ RYDGEITLIG VGGPALEAQG LTSLFDFSEL
SVMGITQVLA KLPRFLTLIG RTAKALVSAK PDLLLIVDSP DFTHRVAKKV RAACPTMPVV
NYVCPSVWAW KEYRAKAMLA YVDSVLAVLP FEPAVMQRLG GPETHFVGHR LVTSPAMLAC
RADRLLRPLP AAEEPKTIML LPGSRGAEIS ALAPVFRDAA RIFVERNGPT RFVLPTVPRR
ERQVREAVAN WEEKPDVVVG EDAKWRAFAE SDAAIAASGT VLLELCLAGV PVVSTYKTDW
LIKLLHSRIK TWTGALPSII ADYVVVPEYL NEQLRGASLA RWMERLSTET RERQAMVEGF
DLVWQKMQTK TPAGEAGAEI VLDVLKTRSI V
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