| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2510 |
|---|
| Symbol | fghA |
|---|
| ID | 7385875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 2070781 |
|---|
| End bp | 2071602 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643651618 |
|---|
| Product | S-formylglutathione hydrolase |
|---|
| Protein accession | YP_002549806 |
|---|
| Protein GI | 222148849 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0627] Predicted esterase |
|---|
| TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.566414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGTCGCAAA ACACCGCCTT TGGCGGCATG CAGGGCGTGT TTTCGCACCA GTCCGATGTC
ACCGGTTGCG AAATGACCTT TGCCGTCTTC GTGCCACCCC AGGCGATCAG TGAAAAGCGC
CCGGTACTCT GGTATCTGTC CGGCCTGACT TGTAGCCATG CCAATGTGAT GGAAAAGGGC
GAATACCGTC GGCTGGCCGC AGAACTCGGC CTGATCATCG TCTGCCCGGA CACCAGCCCA
CGCGGCAATG ACGTGCCAGA TGAGTTGACC AACTGGAAAA TGGGCAAGGG CGCTGGCATG
TATCTGAATG CCACCGAAAT GCCCTGGGCC GAACATTTCC AGATGTACAG CTACATCACC
GAGGAATTGC CCGCGTTGAT TGCTGAACAG TTCCGTGCCG ACATGAGCCG CCAGGGCATT
TTCGGCCATT CTATGGGCGG CCATGGCGCA TTGACCATCG CGCTGAAACA TCCCGACCGC
TTCAAGAGCT GCTCTGCGTT CGCCCCAATC GTCAGCCCGC TAAAAGCCGA TTGGACGCAG
GACGCTTTTG AGAAATATCT CGGTCCAGAC CGTTCCCTCT GGCGTCAGTA TGATGCCTGC
GCTCTGATCG AGGATGGAGC GCGCTTTCCG GAATTCCTGG TGGACCAAGG TAAGGCCGAT
AGTTTCCTGG AAACAGGTCT ACAGCCCTGG CTGCTGGAAG AGGCGGTGAA AAACACCGAT
ATCGGCCTGA CGCTGCGGCT GCATGAGCGC TACGACCATT CCTATTATTT TATCTCGACG
TTTATGGACG ATCACTTGCG CTGGCATGGC GAGCGGCTAT AG
|
|---|
| Protein sequence | MSQNTAFGGM QGVFSHQSDV TGCEMTFAVF VPPQAISEKR PVLWYLSGLT CSHANVMEKG
EYRRLAAELG LIIVCPDTSP RGNDVPDELT NWKMGKGAGM YLNATEMPWA EHFQMYSYIT
EELPALIAEQ FRADMSRQGI FGHSMGGHGA LTIALKHPDR FKSCSAFAPI VSPLKADWTQ
DAFEKYLGPD RSLWRQYDAC ALIEDGARFP EFLVDQGKAD SFLETGLQPW LLEEAVKNTD
IGLTLRLHER YDHSYYFIST FMDDHLRWHG ERL
|
|---|
| |