| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2502 |
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| Symbol | pccA |
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| ID | 7385867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2061583 |
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| End bp | 2065314 |
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| Gene Length | 3732 bp |
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| Protein Length | 1243 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651610 |
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| Product | propionyl-coenzyme A carboxylase alpha polypeptide |
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| Protein accession | YP_002549798 |
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| Protein GI | 222148841 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAA AGGTTCTGAT TGCCAACCGG GGCGAAATCG CCGTCCGGAT CATCAAGACA
TTGCGGCGTC TGGGCATTGC CTCTGTCGCC GTCTATTCCG ATGCCGACCG GTTTGCACTG
CATGTACGGC AGGCCGATGA AGCCATCCGG CTAGGCCCGG CCCACGCCAG CGAAAGCTAT
CTGAATGTCG AGGCGGTGAT TGCCGCCTGC AAGGAAACGG GGGCTGAAGC CGTCCATCCC
GGCTATGGCT TTCTCTCCGA AAATATCGGC TTTGCCGAGC GGCTACAGGC CGAAGGCATC
GCCTTTATCG GCCCGACGCC GGAGAATATT GCCAGCTTCG GCCTCAAACA CACGGCAAGG
CAACTGGCGG CAGACAGCGG CGTGCCATTG CTGCCGGGTA GCGGCTTGCT GGACAGCGCC
GAAGACGCCC TCTCGCAAGC CGAGTTGATC GGCTATCCGG TGATGCTGAA ATCCACGGCG
GGCGGCGGCG GCATCGGCAT GCAGCTCTGC CATGACGCCA CAAGCCTGCA AGCGGCCTTC
GACACCGTAC AGCGCACTGC CAAGGCCAGT TTCGGCGATG CGAGGGTCTA TCTGGAGCGC
TTCGTTTCCA AGGCAAGGCA TGTCGAAGTA CAGATCTTTG GCGATGGACA GGGCCGGGTC
ATTGCACTTG GCGAACGGGA TTGCTCTCTC CAGCGCCGCA ACCAGAAAGT CATTGAGGAA
ACCCCGGCCC CCGGCCTGTC GGACGCGGTG CGCCAGCGCC TGCATGCGGC AGCCGTCTCG
CTTGGCCGCT CGGTCCATTA CCGCTCGGCA GGCACGGTGG AATTCATCTA CGACCCCGCC
CGCAAAGAGT TTTACTTCCT GGAGGTCAAT ACACGGCTTC AGGTCGAGCA TCCCGTCACC
GAGGCGGTGT TCGGTATCGA TCTGGTGGAA TGGATGATCC GCCAGGCTGC CGATGAGGAT
GTGCTGACCG GCAATGAACA TCTGGTGCCG AAGGGGGCGG CCATCGAGGC CCGGATTTAT
GCCGAAATGC CCCATGCCGA TTTTCGCCCC AGCGCAGGCC TGCTGACGGA CGTGGTGTTT
CCGAAAACGG CCCGCGTCGA TGGCTGGATC GAAACCGGCA CGGAGGTGAC ACCCTATTAC
GACCCGATGC TGGCCAAGCT GATTGTCACA GCCAAAGACC GTGAGACGGC GATTACCGCT
TTGCAATCGG CCCTGTCAGA GACGTCCATT TCCGGCATCG AGACCAATCT CGATTATCTC
GCTGCCATTG CCGCCTCTGA TCTGTTTTTA AGCGGTCATG TGGCAACCAC GGCGCTGAAG
GATTTTTCCT TCGTGCCTGA TGTGGTCGAG GTCATCGCCC CCGGTGCGCA ATCCAGCCTT
CAGGAATTGC CGGGGCGGCT GGGGCTTTGG CATGTTGGTG TGCCGCCGAG CGGACCGATG
GACGCCCGCT CCTTTCGCCA CGCCAACCGG CTGGTCGGCA ATGGCGACGA GGTGGCGGCG
CTGGAACTGA CCGTCTCCGG GCCGGTGATG AAATTCTTCT CCGATGTTAC CGTTGCACTG
GCCGGTGCCG AAATGGCGAT GACATTGGAT GGCACGCCGG TCGCGCATAA TACGGCCTTC
ACGGTCAAAC CCGGACAAGT TCTCGCCATC GGCAGGATTT CCGGTCCCGG CCAGCGCGCC
TATCTAGCGG TGTCGGGCGG CTTCGCGGCA CCTGTCGTGC TTGGATCGCG CGCCACCTTT
GGCCTAGGCC AATTCGGCGG CAATGCCACG GGGACCCTTA AGGCAGGCCA TGTGCTACGG
CTGGCTCGCA GCCCACAACC CGTCACCACG CCCGCCGATG AGCCACCGGA GCTGACGAGG
GCATGGTCGG TCGGCGTGGT CTACGGTCCG CATGGTGCGC CGGATTTCTT TCTGGACAGC
GATATCGAAA CGCTGTTTTC GACTGATTAT GAGGTGCATT TCAACAGCGC CCGCACCGGG
GTCCGGCTGA TCGGTCCTGC GCCGACATGG GCGCGGCAGG ATGGCGGCGA AGCCGGGCTT
CATCCTTCCA ACCTGCATGA CAATCCTTAT GCGATTGGGG CCATAGATTT TACTGGGGAT
ATGCCGATCA TTCTTGGTCC TGACGGTCCA AGTCTGGGCG GTTTCGTCTG CCCAGCGGTG
ATTGCCGGTG ACGAACAGTG GAAGATGGGC CAGTTCAAGC CCGGCGATAC CATTCGTTTT
CATCCTGTGG GGCGCGATGG GGATAGTGCC GCTGCTTTAG GAAGTGTCGA GCATGGGATA
CCCCCCTCTG CCTTGCCAGG CATCTCCCCC TCAAGGGGGG AGATCGGGGA TGGTACCGCC
GAAATATCTC GATCCGTATC GTCAAAGAAG ATGTTTTCAG TCTTGCCAAT CTCCCCCCTT
GAGGGGGAGA TGTCCGGTAG GACAGAGGGG GGTAAACCAC CAATTCCAAC GGCAGCTGAA
ACCCGCCTTC CACCAGAAGC CGGCTCCCCC ATCCTCAGCC ACAATTCAAA CGGCCCCGTC
TCCGTCACCT ATCGCCGTCA GGGCGATGAC AATCTGCTGG TGGAATATGG CGAGATGCAG
CTCGACATCG CCATTCGCAT GAGGGTTCAC CTGCTGATGC AAGCGGTCAA GGCGGCCAAG
CTGCCGAGCC TGATCGACCT CACCCCCGGC ATTCGGTCGC TGCAAATCCA TTATGATGGC
ACCAGCCTGT CGCGCACCCG GCTGCTGGGC CTGCTCAGCG AAATCGAGGC CAGCCTGCCC
CCGGCGGGAG ATGTGACGGT GCCAAGCCGC ACGGTCTATC TGCCGCTCTC CTGGAACGAC
CCGGAGGCGG AACTGGCGAT GCGCAAATAC CAGGAGCTGG TGCGGCCCAA CGCCCCCTGG
TGCCCGTCCA ATATCGAGTT CATCCGCCGC ATCAACGGCC TTGCCGACGA GCAGGCCGTG
AAGGACACCA TTTTCAACGC CCGCTATCTG GTGATGGGGC TTGGCGATGT CTATCTCGGC
GCGCCGGTTG CCACACCGCT CGATCCACGC AACCGGCTGG TGACCACCAA ATACAATCCG
GCCCGCACCT GGACGCCGGA AAATGCCGTT GGCATTGGTG GCGCCTATAT GTGCATTTAC
GGTATGGAAG GTCCGGGTGG CTACCAGCTG TTTGGCCGTA CCATCCAGAT GTGGAACACC
TGGCGGCAAA CGCCGGTTTT TACCCGCGAC AAGCCCTGGC TGCTGGATTT CTTCGACCAG
ATCCGCTTCT TCCCCGTCAG CCACGATGAG CTGATGGAGG CCCGCGCTGC CTTTCCACAT
GGCGGCTATC CAATCCGCAT TGAGGATGGC GCGTTTTCCT ATGCAAACTA CGCGGCGGAG
CTGGCTGAAA ATGCCGAAAG CATCGGCACG TTCAAGCGTC AGCAGCAAGC CGCCTTCGAG
GCGGAACGCC AGCGCTGGAA GGACCAAGGC CTCGACAGCT TCACCGCCGA TGAAGACGCG
AGCCCCGGTC CGGGCGGCGA TATTCCAGAC AATTGCTTCG GCGTCGAAAG CGCCGTCCCC
GGCAATCTCT GGAAACTGCT GGTGGAGGAA GGCCAGTCCG TTGCCGCCGG AGAGACAATT
GCCATCATCG AATCGATGAA GATGGAGATC ACGGTGACGG CTCATGCGCC GGGCATCTTG
CGGGAGTTGC GCGCCATCCC AGGAAAGACG GTCAAAGCGG GCGACGTGAT CGCCGTGCTG
CAAAACCTCT AA
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| Protein sequence | MFKKVLIANR GEIAVRIIKT LRRLGIASVA VYSDADRFAL HVRQADEAIR LGPAHASESY
LNVEAVIAAC KETGAEAVHP GYGFLSENIG FAERLQAEGI AFIGPTPENI ASFGLKHTAR
QLAADSGVPL LPGSGLLDSA EDALSQAELI GYPVMLKSTA GGGGIGMQLC HDATSLQAAF
DTVQRTAKAS FGDARVYLER FVSKARHVEV QIFGDGQGRV IALGERDCSL QRRNQKVIEE
TPAPGLSDAV RQRLHAAAVS LGRSVHYRSA GTVEFIYDPA RKEFYFLEVN TRLQVEHPVT
EAVFGIDLVE WMIRQAADED VLTGNEHLVP KGAAIEARIY AEMPHADFRP SAGLLTDVVF
PKTARVDGWI ETGTEVTPYY DPMLAKLIVT AKDRETAITA LQSALSETSI SGIETNLDYL
AAIAASDLFL SGHVATTALK DFSFVPDVVE VIAPGAQSSL QELPGRLGLW HVGVPPSGPM
DARSFRHANR LVGNGDEVAA LELTVSGPVM KFFSDVTVAL AGAEMAMTLD GTPVAHNTAF
TVKPGQVLAI GRISGPGQRA YLAVSGGFAA PVVLGSRATF GLGQFGGNAT GTLKAGHVLR
LARSPQPVTT PADEPPELTR AWSVGVVYGP HGAPDFFLDS DIETLFSTDY EVHFNSARTG
VRLIGPAPTW ARQDGGEAGL HPSNLHDNPY AIGAIDFTGD MPIILGPDGP SLGGFVCPAV
IAGDEQWKMG QFKPGDTIRF HPVGRDGDSA AALGSVEHGI PPSALPGISP SRGEIGDGTA
EISRSVSSKK MFSVLPISPL EGEMSGRTEG GKPPIPTAAE TRLPPEAGSP ILSHNSNGPV
SVTYRRQGDD NLLVEYGEMQ LDIAIRMRVH LLMQAVKAAK LPSLIDLTPG IRSLQIHYDG
TSLSRTRLLG LLSEIEASLP PAGDVTVPSR TVYLPLSWND PEAELAMRKY QELVRPNAPW
CPSNIEFIRR INGLADEQAV KDTIFNARYL VMGLGDVYLG APVATPLDPR NRLVTTKYNP
ARTWTPENAV GIGGAYMCIY GMEGPGGYQL FGRTIQMWNT WRQTPVFTRD KPWLLDFFDQ
IRFFPVSHDE LMEARAAFPH GGYPIRIEDG AFSYANYAAE LAENAESIGT FKRQQQAAFE
AERQRWKDQG LDSFTADEDA SPGPGGDIPD NCFGVESAVP GNLWKLLVEE GQSVAAGETI
AIIESMKMEI TVTAHAPGIL RELRAIPGKT VKAGDVIAVL QNL
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