| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2498 |
|---|
| Symbol | |
|---|
| ID | 7385863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 2058449 |
|---|
| End bp | 2059267 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643651606 |
|---|
| Product | ABC transporter membrane spanning protein (aliphatic sulphonate) |
|---|
| Protein accession | YP_002549794 |
|---|
| Protein GI | 222148837 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.476701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGGA TCAATCAAAA ACCGAGCAAT GGTGCGAAAC TAGGCCTCGC CACCCTGCCC
TTTGTGCTGG TGCTGCTCGC CTACGCCGCA GGTTCGGCGG CACGGCTGGC GGAAAACGCC
AATGACAAGC TGCTGCCGGG CTTTGTCGCC TTTGCCGATG CCATCAACCG TTTAGCCTTT
ACCGCCGATG CCCGCACTGG CGACTATATT CTCTGGACCG ATACGCTGGC CAGCCTGACG
CGGCTTTTCT CCGGGCTTGG CATTTCGCTG CTGATCGCGC TGACCATCGG CATGGCGATT
GGGATGCTGC CCTATCTGCG TGCGCTGCTG TCACCCTTCG TCGCCGCGAT TTCCATGGTG
CCGCCACTGG CGCTGCTGCC TATTCTGTTC ATCGCCATGG GGCTCGGCGA AGTGTCGAAA
ATCACCCTGA TCGTCATCGG CGTTGCGCCG ATCATGATCC GCGATCTGGC GCTCACCGCC
CTGGCCCTGC CGCGCGAACA GATCATCAAG GCCGAGACTC TAGGCGGCTC CTCCTGGCAG
GTCGCCATCA GGGTGGTCCT GCCACAGATC CTACCGCGCC TAATCACCTG TCTCAGATTG
CAGCTTGGCC CGGCCTTTCT GTTTCTGATC GCCGCGGAAG CGATTTCCTC CGATAGCGGT
CTCGGCTACC GGATCTTCCT GGTGCGCCGC TATCTCTCCA TGGACGTGAT TTTTCCTTAC
GTGTTGTGGA TCACGCTGAT TGCCGTTGTC GCCGATGTCC TGCTCGACCG GTTGCGCATC
GCTTTGTTTC CCTGGTCCAA CCTGGAGAAG GGCGCATGA
|
|---|
| Protein sequence | MRWINQKPSN GAKLGLATLP FVLVLLAYAA GSAARLAENA NDKLLPGFVA FADAINRLAF
TADARTGDYI LWTDTLASLT RLFSGLGISL LIALTIGMAI GMLPYLRALL SPFVAAISMV
PPLALLPILF IAMGLGEVSK ITLIVIGVAP IMIRDLALTA LALPREQIIK AETLGGSSWQ
VAIRVVLPQI LPRLITCLRL QLGPAFLFLI AAEAISSDSG LGYRIFLVRR YLSMDVIFPY
VLWITLIAVV ADVLLDRLRI ALFPWSNLEK GA
|
|---|
| |