Gene Avi_2496 details

Gene Information

• Locus tag: Avi_2496
• Symbol: ilvA
• ID: 7385861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 2055687
• End bp: 2056937
• Gene Length: 1251 bp
• Protein Length: 416 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643651604
• Product: threonine dehydratase
• Protein accession: YP_002549792
• Protein GI: 222148835
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1171] Threonine dehydratase
• TIGRFAM ID: [TIGR02079] threonine dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAAA CTGCCGTCCA AGATGCCGTT CATGCGCTTC GCGACCTTTT CCCCGCGACA 
CCACTGCAAT TGAGCGAGCA CTTGAGCACG TTGTTCAATG CCAACATTTA TCTGAAGCGT 
GAAGACCTGA CGCCGGTGCG CTCCTATAAG GTGCGTGGCG CCTATAACTT CTTCCGCAAG 
GTTATCGCCC TGGGGCAGAT CGACAAGATC TTCGTCTGCG CCTCAGCAGG CAATCATGCG 
CAAGGTTTCG CCTTTGCCTG CCGTCATTTC GGCGTGCATG GCGTGGTGTT CATGCCGGTG 
ACCACGCCGC AACAGAAAAT CGACAAGACC CGCAAGTTCG GTGCCGAATT CATTACCATA 
AGGCTGGTCG GCGATATTTT CGACCAATGC TACAAGGCGG CCCGCGACTA TGTTGAGGAA 
GCTGACGGCT TGATGGTGCC GCCTTTCGAC CATGCTGACA TTATCGAAGG CCAAGCAACC 
GTTGCTGCCG AAATTCTGGA GCAACTATCG GAAGAGGTCA CCCCCGATCT GGTGATCATG 
CCCGTCGGCG GCGGCGGCTT GAGTGCGGGC ATGACGGGCT ATCTAGCCGA AGACCTGCCT 
CTATCCGCTT TTCTCTTTGC CGAGCCGGTC GGCGCGCCAA GCCTGAAACG CTCGTTGGAA 
GCGGGTGAAG TCATCACCCT GCCCAAGGTG GATAATTTTG TCGACGGTGC TGCCGTGGCG 
CGGATCGGCG ATGCCAATTT TGCGGCCCTG AAACACTTCC CGCCCGCTCA GGTCATGCTG 
GTGCCGGAAA ATGCGATTTG CGGGACGATC ATCGACATGC TGAATGTCGA GGGCGTGGTG 
CTGGAACCGG CCGGCGCCTT GGCGATTGCC ACACTCGGTC TGCTGGAGCG CTCATCCATC 
GAGGGCAAGA CCGTGGTTCT CGTCGTCTCC GGCGGCAATT TCGATTTCGA GCGCCTGCCA 
GATGTAAAAG AGCGCGCCAT GCGCTATGCC GGTTTGAAGA AATATTTCAT CCTGCGCCTG 
CCACAGCGGC CCGGCGCGTT GCGCGATTTT CTCAACCTGC TCGGCCCCGA AGACGATATC 
GCCCGCTTCG AATATCTGAA GAAATCCGCC CGCAATTTCG GCTCGATCCT GATCGGCATT 
GAAACGACGG ATGCCTCGAA TTTTTCTGGT CTGTTACAGC GGTTCGAGGA AAATGGTCTC 
GGCTATGAAG ACATCACCGA AAACGACATC CTGGCCAATC TGATCATCTG A 

 

Protein sequence

MTKTAVQDAV HALRDLFPAT PLQLSEHLST LFNANIYLKR EDLTPVRSYK VRGAYNFFRK 
VIALGQIDKI FVCASAGNHA QGFAFACRHF GVHGVVFMPV TTPQQKIDKT RKFGAEFITI 
RLVGDIFDQC YKAARDYVEE ADGLMVPPFD HADIIEGQAT VAAEILEQLS EEVTPDLVIM 
PVGGGGLSAG MTGYLAEDLP LSAFLFAEPV GAPSLKRSLE AGEVITLPKV DNFVDGAAVA 
RIGDANFAAL KHFPPAQVML VPENAICGTI IDMLNVEGVV LEPAGALAIA TLGLLERSSI 
EGKTVVLVVS GGNFDFERLP DVKERAMRYA GLKKYFILRL PQRPGALRDF LNLLGPEDDI 
ARFEYLKKSA RNFGSILIGI ETTDASNFSG LLQRFEENGL GYEDITENDI LANLII