| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2478 |
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| Symbol | tig |
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| ID | 7385847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2039887 |
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| End bp | 2041368 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651589 |
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| Product | trigger factor |
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| Protein accession | YP_002549778 |
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| Protein GI | 222148821 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.656979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTTA TCGAAACGCT CGCTGAAGGG CTGAAGCGCG AACTCAAGGT CATCATTCCG
GCCGCTGACA TGGAAGCGCA GATGAATGAG CGCCTTGCCG ACGTTAAGGA CAAGGTTCGC
ATCAACGGTT TCCGTCCGGG CAAGGTACCG GCAGGTCACC TGAAGAAGAT GTATGGCAAG
TCGGTTATGG CCGAACTGGT CAATGAAATC GTTCGCGACC GCCCGTCCGC AATCCTGTCT
GAACGTGGTG AAAAGTCCGC GACCCAGCCG GAAGTGGCGA TGACCGAGGA CGAGGCGGAA
GCCGACAAGA TCCTCAATGC GCAGGCCGAT TTCGAATTCA CGCTTGCCTA TGAAGTCATT
CCCGCTATCG AATTGAAGCC GGTCGACGGC ATCAAGATCG TCCGCGAAGT CGTTGAAGTG
TCGGAAGACG AAGTCAACGA ACAGATCATG AAGATCGCCG AAAGCGCGCG GACCTTCGCC
ACCAAGGACG GTGTTGCTGC TGATGGCGAC CGCGTCACCA TGGATTACCT TGGCAAGGTC
GATGGCGTTC CCTTCGACGG TGGCAAGGAC GAAGATGCAG AGCTGGTCAT CGGCTCCAAC
CGCTTCATCC CCGGCTTTGA AGAGCAGCTG GTTGGCCTGA AGGCTGGCGA CGAAAAGGTC
ATCAACGTGA CCTTCCCGAC CGAATATCCG GCTGCAAATC TGGCTGGCAA GGACGCCACC
TTTGACATCA CTGTCAAGGA AGTTGCGGCT CCTGCTGAAA CCGAGATCAA TGACGAGCTG
GCCACCAAAC TCGGCCTGGA ATCGGTCGAT AAGCTGAAGG AAATCGTTCG CGGCCAGATC
GAAAGCCAGT ACGGCAATGT GACCCGCCAG AAGATCAAGC GTCAGATCCT TGATCAGTTG
GACGAGATGT ACAAGTTCGA AGCGCCTTCG CGTCTGGTTG ATGCCGAATT CGACAATATC
TGGCGCCAGA TCAACACCGA TCTGCAACAG TCCGGCAAGA CCTTCGAAGA TGAAGAGACC
ACCGAAGACG CAGCCCGCGA AGAATATCGT GCGCTTGCCG AACGTCGCGT TCGTCTCGGC
TTGGTTCTGT CCGAAATCGG TGAAAAGGCC GCTATCGATG TGACCGAGGA AGAAATGCAG
CGTGCGCTTT ACGCTCAGTT GCAGCAGTTC CCAGGTCAGG AAAAGCAGAT CATCGACTTC
TTCCGTAACA CGCCCGGCGC CTCCGCCTCG CTGCGTGCTC CGATCTTTGA AGAAAAGGTC
ATGGACAAGC TGATCTCCGA GGTCAATGTT ACGGACAAGA CCGTGACCAA GGAAGAACTG
CTGGCTGAAG ACGAAGACGG CGACGACACC AAGCCTGCCA AGAAGTCGGC CAAGAAGAAG
GCTGCCAAGG CTGAAGACGC TTCCGCTGAA GGCGAAGAAG CCGCTCCAAA GAAGAAGGCA
GCCGCGAAGA AGAAGGCTGC TGACGAAGGC GACGCTGAAT AA
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| Protein sequence | MQVIETLAEG LKRELKVIIP AADMEAQMNE RLADVKDKVR INGFRPGKVP AGHLKKMYGK
SVMAELVNEI VRDRPSAILS ERGEKSATQP EVAMTEDEAE ADKILNAQAD FEFTLAYEVI
PAIELKPVDG IKIVREVVEV SEDEVNEQIM KIAESARTFA TKDGVAADGD RVTMDYLGKV
DGVPFDGGKD EDAELVIGSN RFIPGFEEQL VGLKAGDEKV INVTFPTEYP AANLAGKDAT
FDITVKEVAA PAETEINDEL ATKLGLESVD KLKEIVRGQI ESQYGNVTRQ KIKRQILDQL
DEMYKFEAPS RLVDAEFDNI WRQINTDLQQ SGKTFEDEET TEDAAREEYR ALAERRVRLG
LVLSEIGEKA AIDVTEEEMQ RALYAQLQQF PGQEKQIIDF FRNTPGASAS LRAPIFEEKV
MDKLISEVNV TDKTVTKEEL LAEDEDGDDT KPAKKSAKKK AAKAEDASAE GEEAAPKKKA
AAKKKAADEG DAE
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