Gene Avi_2473 details

Gene Information

• Locus tag: Avi_2473
• Symbol: speB
• ID: 7385843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2034782
• End bp: 2035837
• Gene Length: 1056 bp
• Protein Length: 351 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643651585
• Product: agmatinase
• Protein accession: YP_002549774
• Protein GI: 222148817
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family
• TIGRFAM ID: [TIGR01229] arginase; [TIGR01230] agmatinase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTTCG ACAATGAAAA GCTCGACGCG CTGCGACGTA AATATGGCGG CGAAACCGGC 
GGGGAAGTGT TTGATCCCCG CTTCAAGCGG GTGGCTGAAA AGATTTTTGA CAGTAAGGGA 
ACAAGGCTTG CTCCTTATTC CGGCATTCCG ACGTTTCTCT CGGCGCCCTA TCGGCAGGTC 
GAGGCGGACA ATCCGGATTT TGGCGGTTTG GACGTGGGCA TTATCGGCGT GCCGATGGAT 
CTGGGCGTCA CCAACCGCCC TGGTTCCCGC TTCGGGCCGC GTGCCTTGCG CACCATCGAG 
CGGATCGGGC CGTATAACCA TGTGCTGGAT TGCGCGCCTG TCCATGAATT GAAGGTGGCT 
GATGTCGGTG ATGTGCCGTT TGCCAGCCGC TATAGATTGG AACAGAGCCA TGTCGATATT 
GAACAACGTA TCGGTCAGAT GGTGACACAA GGAGTGGTGC CGCTTAGCGT CGGCGGCGAT 
CACTCAATTA CGCATCCGAT CCTGAAGGCC GTCGGGAAAG ACCGACCGGT CGGGCTTATT 
CATATCGATG CCCATTGCGA TACCAGCGGC CTGTTTGATC AGACCAAGTT TCACCATGGC 
GGCCCATTTC GAAATGCGGT GCTGGATGGT GTATTGGACC CGTCGCGCAC GGTGCAGATC 
GGTATTCGTG GACCGGCGGA ATATCTTTGG GAATTCAGCT ATGAAAGCGG CATGACAGTT 
ATTCATGCCG AAGAGATTTC AGCGCTTGGC ATTCCAGCGG TGATCGCCAA GGCTTTGCAG 
GTGGTCGGGG ATGGTCCGAC CTATCTGTCT TTTGATATCG ACAGTCTCGA TCCGGCCTTT 
GCGCCAGGAA CTGGCACGCC CGAGGTCGGC GGCTTGACCA CGCGCGAGGT GCTGGAACTG 
CTGCGCGGTC TGAAAGGTGT CAACCTTGTC GGTGGCGATG TTGTGGAAGT CGCGCCGCAA 
TATGACAGCA CCACAAATAC GGCGCAGGCG GGGGCGCAGG TGCTGTTCGA AATCCTCAGC 
CTGATGGTTT TCAGTCCGTC CATTGGCAAG GAATAG 

 

Protein sequence

MAFDNEKLDA LRRKYGGETG GEVFDPRFKR VAEKIFDSKG TRLAPYSGIP TFLSAPYRQV 
EADNPDFGGL DVGIIGVPMD LGVTNRPGSR FGPRALRTIE RIGPYNHVLD CAPVHELKVA 
DVGDVPFASR YRLEQSHVDI EQRIGQMVTQ GVVPLSVGGD HSITHPILKA VGKDRPVGLI 
HIDAHCDTSG LFDQTKFHHG GPFRNAVLDG VLDPSRTVQI GIRGPAEYLW EFSYESGMTV 
IHAEEISALG IPAVIAKALQ VVGDGPTYLS FDIDSLDPAF APGTGTPEVG GLTTREVLEL 
LRGLKGVNLV GGDVVEVAPQ YDSTTNTAQA GAQVLFEILS LMVFSPSIGK E