| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2398 |
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| Symbol | |
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| ID | 7386033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1966738 |
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| End bp | 1967787 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651526 |
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| Product | transcriptional regulator LacI family |
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| Protein accession | YP_002549715 |
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| Protein GI | 222148758 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATG AGCGAAGACC AGGCCTGAAA ACGGCCTTAC ATGCAGGGGC CGTACATGAG
GGGAAGGGCG AACGCCCTAC CCTCAAGACC ATTGCCTTCC TGACCGGGCT CGGCATTACC
ACGGTATCGC GCGCGTTGAA GGATGCGCCG GATATCGGCG CCGATACCAA GGAGCGGGTG
CGGATGGTGG CGCGGCAATT GGGCTATCAG CCCAACCGTG CGGGAGTGCG CCTGCGCACC
GGCAAGACCA ATGTCATCGC CCTGGTGCTC AGCATCGATG AAGAAATCAT GGGTTTCAGC
AGCCAGATGG TTTTCGGCAT TTCCGAAGTC TTGTCAGGCA CGCCTTACCA TATCGTCGTC
ACCCCGCATT CCCATAGCAA AGACCCGATG CAGCCGGTGC GCTATATTCT TGACACCGGT
TCGGCGGATG GGGTGATTAT TTCACGCACC GAACCCGACG ATGCCCGCAT CAAGCTGCTG
ACAGAGCGCG GCATGCCGTT TGCCGCCCAT GGCCGCACGG CATCCGGTCT CATCCATCCG
TTTCACGATT TCGACAATGA GGCCTTTGCC AGCCAGGCGG TAAAGCGCCT CGCCGAGCGT
CATCGGCGGA GGATCGCCTT GTTACCGCCG ACCGACAAGT TGACCTATTA CCGCCATACC
CATGATGGCT TTGTGGCCGG CATCCGTGAG GCCGGTGCTG AAGAAGTGCC GGTTTCCGTC
AATATCGATG GATCGCTCGA GGAGATCCGC AACGCGATAG AAGCACTGAT GCGCTCACCA
GAGGCCCCAG ACGGAATCAT CTGCTCTTCC AGCAGCGCCG CGATCGCCGT CAACGCCGGT
ATTGATGCCG CGAACAAGAG GCTGGGCCTG GATGTTGATC TCGTATCCAA GCAATCGGTG
CCAATCCTCA AGTGGATACG TCCTGAAATC ATCACCGCCA ATGAGGATGC GTTGATGGCC
GGACGCGAAC TCGCCAAGGC GGTGATTGCC AGCATCGATG GCGTGGAGCC GCATCTGCTG
CAAAGCATCA GCCAGCCTGT GTGGTCCTGA
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| Protein sequence | MNDERRPGLK TALHAGAVHE GKGERPTLKT IAFLTGLGIT TVSRALKDAP DIGADTKERV
RMVARQLGYQ PNRAGVRLRT GKTNVIALVL SIDEEIMGFS SQMVFGISEV LSGTPYHIVV
TPHSHSKDPM QPVRYILDTG SADGVIISRT EPDDARIKLL TERGMPFAAH GRTASGLIHP
FHDFDNEAFA SQAVKRLAER HRRRIALLPP TDKLTYYRHT HDGFVAGIRE AGAEEVPVSV
NIDGSLEEIR NAIEALMRSP EAPDGIICSS SSAAIAVNAG IDAANKRLGL DVDLVSKQSV
PILKWIRPEI ITANEDALMA GRELAKAVIA SIDGVEPHLL QSISQPVWS
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