| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2396 |
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| Symbol | gnd |
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| ID | 7386031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1964340 |
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| End bp | 1965776 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651524 |
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| Product | 6-phosphogluconate dehydrogenase |
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| Protein accession | YP_002549713 |
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| Protein GI | 222148756 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.288953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTATGC AGCAGGCGGA AATCGGACTG ATCGGCCTTG GCGTTATGGG ATCGAACCTG
GCGCTCAATA TTGCCGAGAA AGGCAACCGC ATCGCGGTCT TCAACCGGAC ACCGGCGCGC
ACGCATGAAT TCATCGGCGA GGCGGGCGAC CTTGCCGGCA ATATCATCGG CTGCGACACA
ATCGAGGAGT TTGTGGCCGC CATTCGCCCA CCGCGCCCGA TCATCATCAT GATCAAGGCT
GGCGACGCCG TCGATCAGCA GATGGAATTG CTCAAGCCGC ATCTTTCGGC CAATGACATC
ATGATCGATG CGGGCAATGC CAATTTCCGC GACACGATCC GCCGTTTCGA CAATCTGAAG
GATAGCGGCC TGACCTTTAT CGGCATGGGC GTTTCCGGTG GTGAGGAAGG CGCGCGTCAC
GGCCCTTCGA TCATGGTCGG CGGCCTGGAG GAAAGCTGGA AGCGGGTCGA AAAGGTTCTC
ACCTCGATTT CCGCCAAGTT CAATGGTGAC CCCTGTGTGG CCTGGCTCGG CAATGATGGG
GCCGGTCATT TTGTCAAGAC CATCCATAAT GGTATCGAAT ATGCCGACAT GCAGATGATT
GCCGAAATCT ATGGCATCCT GCGCGATGGG CTTGGGATGT CGGCCAGCGA AATCGGCGAT
GTATTCGGCC AGTGGAACAA GGGCCGCCTG AATTCCTACC TGATCGAAAT CTCTGAAAAG
GTGCTGAAGG CCAAGGACCC GATCACAGGC AATCCGATGG TGGATGTCAT CGTCGATGCC
GCAGGCCAGA AAGGCACCGG CAAATGGTCG GTGATCGAAG CGCAGAATCT CGGCATTGCC
GCGACCGGCA TCGAGGCCGC TGTGGCGGGA CGTGTCCTGT CTTCGCAAAA GCAGGAGCGT
GTTGCGGCGG AAGGAATTTT CGGCCTGCCG AAACCCGTCG AAAAGCCGCA TGACGGCATG
GCTTTCCTAG CCGATCTGGA AAGCGCGCTG CTGGCGGCAA AAATCGCTGC CTATGCCCAG
GGGTTTGCGG TGATGGCTGC GGCCTCCAAG GAATTCGGCT GGTCGCTGCC GATGCCGACG
ATTGCGAAAA TCTGGCGGGA AGGCTGCATC ATCCGCTCGC AATTCCTCGA CGAAATCACC
TCGGCCTTTA CCAAGGACCC TGACGTGGCA AACCTGATCG TCACACCGGC CTTCTCGAAA
ATGGTCAAGG ATAGCGATGC AGCCCTTCGC CGCGTCGTCT CCTACGCAGC CCTTTCCGGC
CTGCCGGTTC CGGCCCTTTC CTCGGCACTG TCCTACTTTG ACAGCTACCG TCGCGGTCGC
GGCACCGCCA ACCTCATCCA GGCGCAGCGC GACTTCTTTG GCGCACACGG TTTTGCGCGG
GTGGACGGCA AGGATTATCC GCACGGCCCC TGGGGCAGCG GTGCAGCGAT CTACTGA
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| Protein sequence | MVMQQAEIGL IGLGVMGSNL ALNIAEKGNR IAVFNRTPAR THEFIGEAGD LAGNIIGCDT
IEEFVAAIRP PRPIIIMIKA GDAVDQQMEL LKPHLSANDI MIDAGNANFR DTIRRFDNLK
DSGLTFIGMG VSGGEEGARH GPSIMVGGLE ESWKRVEKVL TSISAKFNGD PCVAWLGNDG
AGHFVKTIHN GIEYADMQMI AEIYGILRDG LGMSASEIGD VFGQWNKGRL NSYLIEISEK
VLKAKDPITG NPMVDVIVDA AGQKGTGKWS VIEAQNLGIA ATGIEAAVAG RVLSSQKQER
VAAEGIFGLP KPVEKPHDGM AFLADLESAL LAAKIAAYAQ GFAVMAAASK EFGWSLPMPT
IAKIWREGCI IRSQFLDEIT SAFTKDPDVA NLIVTPAFSK MVKDSDAALR RVVSYAALSG
LPVPALSSAL SYFDSYRRGR GTANLIQAQR DFFGAHGFAR VDGKDYPHGP WGSGAAIY
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