Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2360 |
Symbol | |
ID | 7386005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1928626 |
End bp | 1929855 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643651498 |
Product | hypothetical protein |
Protein accession | YP_002549687 |
Protein GI | 222148730 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.825232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTT GGTACTATGC AGCAGGGCAA GATCAAAAAG GCCCTGTCGG AGAAGACGAA ATACGTGCGC TCATAAAGAA CGGGCAGATC ACAAGAGAAA CCAATGTATG GCGTGAAGGC ATGGATGCTT GGCAACAAGC GGCAGAGCAT CCAGACCTGT CAAGCGCGCT CTCGATACCG CCTCCATTGC CTGTTGCGTC ATCAGGAAAG AGACCACCAC CAATTTTTGA ACCACCTATA GTTAAACCGG GAATCGTGAT CACCTCGCGA CCTTGGCCAC GTTTTTGGGC GAGGTCCATC GACAATCTCA TCTTCACTCC GCTATTCAGC TTCGGAATAG GCTTTTGGTC GGTTCTATAT GCTCCGGATA TTTACCTCCA GATCTTGACG ATGAATGACC TCCTTTTCAG GATCCTATTG CTTCCGCTCA TCGCCATATT CCTTGCTTTT TTTATGATTG TCGTCGGCAC CACACCTGGG AAGGCCATTG TCGGCGTGCG AGTGCCTGTC CCCCAGGGCC GGAATCGGAT TACTTTCTTC CTTTCCAGAG AGTTCAAGGT TTGGACTCAA GGTCTTGGGC TTGGCATCCC TTTCGTCGTG CTCTTTACTC AAATCCGCCA ATATCGTCTT CTTGCAGAAG GCAACGTCGC CAGCTACGAT GAAGGCAATC CTGAAATCAT CGCCAATCCA TCGAAAGTGC GTCTGGCCGC GGGGATCGTC GTCGTCGCAG CCCTGTTCAC GGGTAATATT ATCCTGGGGA CTGAAGATCA GAAGGCCGAG ACAAATCTCA ACACCAAACA GACCTGGATG AACCCAGTTA CGAATAAGAC GGCTACCATC GGGAAGACCT GGCAGGCACA GGAGGTGAAG ATCAACAGCG GGCGGGTGTT TTACTTCGCC TCCAACGAAT TGCTTGTCGA GGCAATCTTT GGCTACGAGC AGTTTCCATC TGGCGGGGCG ACGGTCGCCG CCTATGCCGA TGCGCTGAAG TTGGCTGTCG CCCCGGATGT CAGCCTCGAC TCGCAGTGGA GGCCCGTCAC TATCGAAGGC ATGTCAGCCT TCAGGGCGAC GGGAAAATCT GTAAAATACA CTGACCGCAT TGTTGAAGTG ACTGTCGTGG TCAAAGGACG CGACGCCTGG AGGACGCTCA TATTTGCCAG AGGGAATTCG CCCGCACAGG CGGCAGAGAA AGATAAGTTT GTACAAGCCA TGCTGGGAAC GGCGAATTGA
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Protein sequence | MAAWYYAAGQ DQKGPVGEDE IRALIKNGQI TRETNVWREG MDAWQQAAEH PDLSSALSIP PPLPVASSGK RPPPIFEPPI VKPGIVITSR PWPRFWARSI DNLIFTPLFS FGIGFWSVLY APDIYLQILT MNDLLFRILL LPLIAIFLAF FMIVVGTTPG KAIVGVRVPV PQGRNRITFF LSREFKVWTQ GLGLGIPFVV LFTQIRQYRL LAEGNVASYD EGNPEIIANP SKVRLAAGIV VVAALFTGNI ILGTEDQKAE TNLNTKQTWM NPVTNKTATI GKTWQAQEVK INSGRVFYFA SNELLVEAIF GYEQFPSGGA TVAAYADALK LAVAPDVSLD SQWRPVTIEG MSAFRATGKS VKYTDRIVEV TVVVKGRDAW RTLIFARGNS PAQAAEKDKF VQAMLGTAN
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