| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2314 |
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| Symbol | |
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| ID | 7386389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1900153 |
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| End bp | 1901073 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651471 |
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| Product | Periplasmic serine proteases (ClpP class) |
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| Protein accession | YP_002549660 |
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| Protein GI | 222148703 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.281542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTC GCTATGGCCA TATCGCGCAG CGGGTGTTCA ACACACCGTT GCTCTACGAT
CCGCGCAAGG CGGAAGCTTT CTTGCAGGGC ATGGGCAGCC GGATCGCCGG TGATACCATC
GTCATCGCCA ACCCGGCGGG CGCTGCGGAT CATGTTGCTT TCGGCAATGG CCGTCCACTG
GCGGGTAAGG TCGGGAACCG GCTGGAGCGA GCCTACCAGC GGGCCAATAT GTTGCCGTTC
GACATGATCG ACAACATTGC AATTATTCCG GTCGAGGGCA GCCTTGTCCA CAAGGGTGGG
TGGGTCGGTT CGGCATCTGG CGAGACCTCC TATCAGGGTT TGCAGGCTCA AGTCGCGGCG
GCGCGCAAAT ACGCGGGCGT CAAAGGCGTG GTGTTCGAAT ATGACAGCTA TGGCGGCGAG
GTGAACGGCG GGTTTGAAAC CGCTGCTGCC ATGCAGGCGC TTTCGCGAGA AAAGCCAACC
TTGGCGATCC TGACCGATTT TGCCTATTCG GCGGGGTATC TGCTGGCATC GCAGGCGCGG
GGCATCGTCA TGCCGGAATT CGGCGGGGCC GGGTCGATTG GCGTGATTAT CATGCATGCC
GATTATTCGC AGGCCCTTGA ACAAGATGGC ATCAAGGTCA CCATCATCCG TTCCGGCAAG
AAAAAGGCGG ATGGGAACCC CTACGAACCA TTGTCCGCCG ATGTTGCCGA CCGCTGGCAG
GCGCAGGCCG ACCAGATGCG CGACAAATTC GCCGAAACCG TCGCCAAGGG CCGCAAGAAC
CGGATCACTA AGGCGAAGGC GCTGGCGTCT GAAGCCGATG TCTATGATGC AAAACAGGCC
CTTTCCATGG GTTTGGTGGA TGCCATCGGC GATCCCATCG AGGCGTTCGA CGCCTTCGTG
AAGGAAGTTA ACCGGAGTTG A
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| Protein sequence | MSFRYGHIAQ RVFNTPLLYD PRKAEAFLQG MGSRIAGDTI VIANPAGAAD HVAFGNGRPL
AGKVGNRLER AYQRANMLPF DMIDNIAIIP VEGSLVHKGG WVGSASGETS YQGLQAQVAA
ARKYAGVKGV VFEYDSYGGE VNGGFETAAA MQALSREKPT LAILTDFAYS AGYLLASQAR
GIVMPEFGGA GSIGVIIMHA DYSQALEQDG IKVTIIRSGK KKADGNPYEP LSADVADRWQ
AQADQMRDKF AETVAKGRKN RITKAKALAS EADVYDAKQA LSMGLVDAIG DPIEAFDAFV
KEVNRS
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