Gene Avi_2268 details

Gene Information

• Locus tag: Avi_2268
• ID: 7386358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1861713
• End bp: 1862339
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643651435
• Product: hypothetical protein
• Protein accession: YP_002549629
• Protein GI: 222148672
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.283815
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGATTA TCCTGCTGCT CAAGGGCGTG TTGCTCGGTA TTGCCGTGGC CGCACCGATT 
GGGCCAATCG GCACGCTCTG TATCAACCGC ACCATGGAGC GTGGTTTCTG GCATGGGGTG 
TCAGCCGGGC TTGGAGCTGC CATCGGCGAC ATGGTCTTCG CCATTGCTGC CGCAGCGGGC 
TTTGCCGCCA TGCAGGATCT GCTGGCTGAA ATATCACTGC CGCTAAAACT GGTCGGTGGC 
ACGCTGATTT TGCTGATCGG TATCCGCATG CTTGCAGCGC GGCCACCGCG ACCGGCAGCA 
CAGATCAAGG CCAGCGATTT TATCCGCACC ACCATGTCCA CCTTCGGGCT GACGATTACC 
AATCCTGCGA CAATCTTTGG TTTCGCAGCA TTATTTGCAG GCGCGGGTCT CGCCGATACC 
GGCGAAGTCA GCCCGTTCTT TTTGGTTGCA GGGGTGTTTC TTGGGTCGCT GATCTGGTGG 
TTTGCGCTGT GCGGCGCTGT CGTCTGGCTG AAAAGCCGAT TGCCGGACCA TTTCACGATC 
TGGGTTCAAC GCGGCTCCGC CGTGCTGCTG ATCGGCTTCG GCCTGATTTC TCTCGGCCTT 
GCCGCCCGGC AATATTGGGG TGGGTGA 

 

Protein sequence

MLIILLLKGV LLGIAVAAPI GPIGTLCINR TMERGFWHGV SAGLGAAIGD MVFAIAAAAG 
FAAMQDLLAE ISLPLKLVGG TLILLIGIRM LAARPPRPAA QIKASDFIRT TMSTFGLTIT 
NPATIFGFAA LFAGAGLADT GEVSPFFLVA GVFLGSLIWW FALCGAVVWL KSRLPDHFTI 
WVQRGSAVLL IGFGLISLGL AARQYWGG