| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2216 |
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| Symbol | nadB |
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| ID | 7387919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1820046 |
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| End bp | 1821596 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643651400 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_002549594 |
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| Protein GI | 222148637 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.677644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGC TGAATACCAC CATAGGTGAC CGGGTCATCG TGATCGGCAG CGGCTTGGCC
GGCGTGGTAA CGGCGCTCAG CCTTGCGCCG CAGCCTGTCA CCATCGTCAC TCGCGCTGCT
CTCGGTGCGG AAACCTCCAG CGCCTGGGCG CAAGGCGGCA TTGCCGCCAG CATGGGAACT
GATGATAGTG CGGCGCTCCA TGCGGCAGAT ACGCTTGCGG CGGGTGATGG GCTCTGCGAT
CCTGATATCG TCGAGATAAT AACCTCCGCT GCGCCTTTGG CGATTGCCCT GCTGGAACGG
TTTGGCGTCC GTTTCGACAG GAATGGCGAT GGTGCGTTGG CGCTGGGCTT GGAAGCCGCC
CATGGCCGTC GTCGCATTGT CCATGCCGGG GGTGACGGGT CCGGCGCGGA GATTATTCGG
AGTCTTGTGG CTGCGGTGTT GGCCACGCCA TCGATTTCCG TGATGAGCGG ACTTCAGGTG
CGCCGCCTGC TGGTCGATGC AGGCGGGATA ACGGGATTGC TCTGCGCCTC GGCGTCAGGA
CCGGTGCAGA TTGCCGCTTC GCGGGTGATT CTGGCCACCG GCGGCCTTGG CGGTCTTTAC
GATGCCACGA CCAATCCCTC TGGCAATTAC GGACAGGGCA TCATGCTCGC TGCCCGCGCC
GGTGCGGTTT TGTCGGATAT GGAGTTTGTG CAATTTCACC CGACAGCGCT GGATGTTCCT
CTCTATCCGC AGCCGCTGGT GAGCGAAGCC GTGCGCGGCG AGGGCGCTGT GCTGGTCAAT
GAGCGTGGCG AGCGCTTCAT GGCATCCACT CCCGGAGCTG AACTTGCGCC GCGCGACGTC
GTGGCGCGGG CGATCAGCGC AGAGCGGGCC AGGGGAGGCA CGGTTTTCCT TGATGCCCGA
AAGGCGCTCG GTCACGGTTT TTCCCGCCGG TTTCCCGCCA TCGACGCTCT CTGCCGAGCG
GTTGGCATCG ATCCGTCGTC GCAACCCATC CCGGTGCGCC CCGCGGCCCA TTATCACATG
GGCGGTGTGG AGACCGATTG TTTCGGCAAA ACCTCGGTTG CCGGTCTCTG GGCGGCAGGC
GAGGTGGCCT GCACCGGTCT GCATGGCGCC AACCGCCTGG CCAGCAATTC GCTGCTGGAA
GCGGCGGTAA TGGGTATGCG GGTCGCAGAA GATGTAGCGG GCATGTCGCC CCGTCAGATA
ATGCCTTCCG GGTCGCAAAC TGTGCCTCCT GCCGATGACA TTGCGCCGGT TCGGGCGATC
GTCTCGTCGC GGCTTGGCGT CTTGCGCAAC GAGCGTGGCT TGCAGGCGGC AATGGCGGAT
CTTCTGCCAC TCGTTGAAGC TGGCGGACCG GCCAGCGATC CGGCATTGGT GGCGCTGCTG
GTCGCCGTGT TTGCCCATGC GCGACGCCAT TGCGCGGGCG CCCATGCAAG AACCGATTTT
CCGCAATCCT GCCCAGACCC TCTGCGCCAG CGGATGACGC TGGATGACGC ACTGTCCCTT
GCCCACGCCG CCGTTTTTCC TGCCTTGCAG CCCTTTGCCC GGAGCGCCTG A
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| Protein sequence | MSTLNTTIGD RVIVIGSGLA GVVTALSLAP QPVTIVTRAA LGAETSSAWA QGGIAASMGT
DDSAALHAAD TLAAGDGLCD PDIVEIITSA APLAIALLER FGVRFDRNGD GALALGLEAA
HGRRRIVHAG GDGSGAEIIR SLVAAVLATP SISVMSGLQV RRLLVDAGGI TGLLCASASG
PVQIAASRVI LATGGLGGLY DATTNPSGNY GQGIMLAARA GAVLSDMEFV QFHPTALDVP
LYPQPLVSEA VRGEGAVLVN ERGERFMAST PGAELAPRDV VARAISAERA RGGTVFLDAR
KALGHGFSRR FPAIDALCRA VGIDPSSQPI PVRPAAHYHM GGVETDCFGK TSVAGLWAAG
EVACTGLHGA NRLASNSLLE AAVMGMRVAE DVAGMSPRQI MPSGSQTVPP ADDIAPVRAI
VSSRLGVLRN ERGLQAAMAD LLPLVEAGGP ASDPALVALL VAVFAHARRH CAGAHARTDF
PQSCPDPLRQ RMTLDDALSL AHAAVFPALQ PFARSA
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