| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2213 |
|---|
| Symbol | |
|---|
| ID | 7387916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 1817189 |
|---|
| End bp | 1817725 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643651397 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549591 |
|---|
| Protein GI | 222148634 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4337] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAGA AATTTATATT TTTAAATTTT GTAATGACAT CGGTTTTGAT GTCATCAGGC
GCAAGCCGGG CGGAAAACTG CCCAGCCGCA ATCAGCGAAG CCGATGTGAT TCAGGCAGAG
GAGAGATGGG GGAAAGGATT GGTCGAAATC GGGGCAGCGC AAGACGCAAG AGCCGTGGCA
GCAAAATTCA TAGCTGACGC TTACGGCTAT CAGGAAGGAA CGGTCCTGTT CAAGCCGACC
AAGGCTTCCG TAGTTGAGTT TCGCGATACG CCGGAAGACG CGCTATCCTA TTTCGTCACC
GGAAGGCTGG CGGAAGACCA CGGATTTGCG CTGACACCCT ATACGAATGT GCGGTTTGAA
AACCACGCGA TCATCTACGA CTGCAAAACA GCAATCTCCA TGGGCAATTA CTACTTCACC
GCCAAGGACG GCTCAGTGAC CAAAGCCGAT TACACGATGG GCTTTATCAA AACCGCAGAT
GGCCATATGA AAATCAATAT CCAGCATTCA TCGCTGCCAT ACACGCCCAG TCATTAA
|
|---|
| Protein sequence | MIEKFIFLNF VMTSVLMSSG ASRAENCPAA ISEADVIQAE ERWGKGLVEI GAAQDARAVA
AKFIADAYGY QEGTVLFKPT KASVVEFRDT PEDALSYFVT GRLAEDHGFA LTPYTNVRFE
NHAIIYDCKT AISMGNYYFT AKDGSVTKAD YTMGFIKTAD GHMKINIQHS SLPYTPSH
|
|---|
| |