8 homologs were found in PanDaTox collection
for query gene Avi_2213 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_2213  hypothetical protein  100 
 
 
178 aa  372  1e-102  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2918  hypothetical protein  47.9 
 
 
177 aa  148  3e-35  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.135282 
 
 
-
 
NC_009456  VC0395_0992  hypothetical protein  39.22 
 
 
189 aa  106  1e-22  Vibrio cholerae O395  Bacteria  decreased coverage  9.86598e-16  n/a   
 
 
-
 
NC_008820  P9303_16071  hypothetical protein  34.73 
 
 
201 aa  84.7  6e-16  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_008228  Patl_2446  hypothetical protein  34.48 
 
 
154 aa  81.6  0.000000000000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.02931  n/a   
 
 
-
 
NC_007516  Syncc9605_0723  hypothetical protein  32.6 
 
 
216 aa  78.2  0.00000000000005  Synechococcus sp. CC9605  Bacteria  normal  0.452997  normal 
 
 
-
 
NC_007513  Syncc9902_0432  hypothetical protein  29.63 
 
 
209 aa  75.1  0.0000000000005  Synechococcus sp. CC9902  Bacteria  normal  0.0928622  n/a   
 
 
-
 
NC_012912  Dd1591_2143  Calcium/calmodulin dependent protein kinase II association-domain protein  30.26 
 
 
152 aa  41.2  0.008  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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