Gene Avi_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2209 
Symbol 
ID7387914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1814562 
End bp1814948 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content62% 
IMG OID643651395 
Producthypothetical protein 
Protein accessionYP_002549589 
Protein GI222148632 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.304599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCCAGC ACTGCGAAAA CCTCGACGAC GAGGAGGACG AAAGGCCGCG CCACAGAGGC 
CGGAATTATC ACGGACCTTT TCGCAAGACA CCGGACCGGC TGCTGGGCAT GGGGCTGATC
CGACTCTACC AGTTGACGCT TTCCAGCCTG GTCGGCAGTC ATTGCCGGCA TTCCCCGACT
TGCTCGGAAT ATGGTTATGA GGCCATCGCC CGCCATGGAT TGTGGAGTGG CGGCTGGCTC
ACCCTGTTTC GGGTCGGGCG CTGCGGCCCC GGCGGCACCT GGGGCGTGGA TGATGTGCCG
CAGACCCTTG GCACCCGCTT TCGGTTTTGG CAGGTCTGGA GCCTGTGGAC GTTTGGACGC
AAGCGTCCTT CAAGGCAGGT TTTATGA
 
Protein sequence
MCQHCENLDD EEDERPRHRG RNYHGPFRKT PDRLLGMGLI RLYQLTLSSL VGSHCRHSPT 
CSEYGYEAIA RHGLWSGGWL TLFRVGRCGP GGTWGVDDVP QTLGTRFRFW QVWSLWTFGR
KRPSRQVL