| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2173 |
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| Symbol | |
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| ID | 7387888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1788629 |
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| End bp | 1790104 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651369 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549563 |
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| Protein GI | 222148606 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4222] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.688585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATTTT CACGCAAGGC ATTGCTTCTG GCTGCAACTG TTCTGGTCTC TTCGGCTGGT
TTCGTTCTGG CGGAAGGAAC GGTCAGCGCC AATGGAGTGA CGATCGCCAA CAAGGGCCTT
GTCGCAATCG GCCGCATTCC GGCCAACGAG CGCGACAAGT TCAAGGAAAC TTTCGGCTCC
GGCTCCGGCA TGGCAGTCGA TCTGACCCAA TGGAAAAAGC AGGGCGAGAC CTATTCCGGT
TCGCTTTGGC TCCTGCCGGA TCGTGGCTAC AATGTCGAAG GCACGACGGA TTACAACACC
CGTATCAACA AGATTGATTT TACCCTGGCG CCAGCACCGG CAGGAACCAC TCTGCCAGCC
GATAAGCAGC AGAAGGGCTT TGACGCAAAG CTTGCCGATA CGATCCTGTT GACGGATGGC
GAGGGCAAGA GCCTGACAGG CCTGGACCCG GAATCGGGTG TTCGCGCTGC GACCAAGACA
TTGCCAGCCT TGCCGCAAGC AACCACCGGC AAGATCTCGC TCGATCCGGA AGCCGTGGTC
CTGTTGAAGG ACGGCTCGAT GATGATCAGC GACGAATATG GCCCCTATAT CTATCATTTC
TCGGCAATGG GAAAATTGAT TTCCGCCACC CAGCCGCCGA AAGCCCTTCT GCCGATGCGC
AAGGGTGAGC TGAACTTCTC GTCCAACAAT GTTGGTGAAG GCGGCAAAAA GCCGGACCCG
AAGGACCCGG ATACCGGTCG CCAGAACAAT CAGGGCCTGG AAGGCATGTC GCTGACGCCG
GATGGCAAGT TCCTGATCGC GCTTTTGCAA ACAGCGACCC GTCAGGATGG CGGCGATAGC
AGCTCCACAC GGATGAATAC CCGCGCCCTG GTTTATGATG CAGCCGATAT GGATCATCTG
AAGCTGGTGC ATGAATATGT CGTGCCGTTG CCGACCTTCG ACAGCAAGGG CAAGGTTGCC
GTGGCCGCCC AGAGCGAAAT CCTGGCCTTG TCGGACAAGA CCTTCCTGAT GCTGGCCCGT
GACAGCAATA GCGGGCAGGG CATGAAGAAC GACACATCGG TCTATCGCAA GATTGATCTG
GTCGATCTGT CAGCGGCCAC TGACATTGCC AACAGCGAAT TCGATGATGC GAAGCCGGTG
GCCCCGAAGG GCGTGGTGGA TGCCTCAGTC AAGGTGGCAG CGGTGACGCC GTTCATCGAC
ATCAACGACA ACAAGGACCT CGCCCGCTTC GGCCTGCACA ATGGCGCGCC GAACGATGCC
AACAATCTCT CCGAAAAATG GGAGGCGATG TCGGTCGCAT CGGCCCTCGA TCCAGCCGCT
CCGGACGATT ATTTCCTGTT TGTCGCCAAT GACAACGACT TCCTGACCCA GGATGGCTAT
CAGGTCGGCG CGGCTTACAA GGCCGAAGGT GGTGCCGATG TTGATACCAT GTTCCAGGTG
TTCCGCGTGA CACTGCCGGG CATGACTGCC AAGTAA
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| Protein sequence | MVFSRKALLL AATVLVSSAG FVLAEGTVSA NGVTIANKGL VAIGRIPANE RDKFKETFGS
GSGMAVDLTQ WKKQGETYSG SLWLLPDRGY NVEGTTDYNT RINKIDFTLA PAPAGTTLPA
DKQQKGFDAK LADTILLTDG EGKSLTGLDP ESGVRAATKT LPALPQATTG KISLDPEAVV
LLKDGSMMIS DEYGPYIYHF SAMGKLISAT QPPKALLPMR KGELNFSSNN VGEGGKKPDP
KDPDTGRQNN QGLEGMSLTP DGKFLIALLQ TATRQDGGDS SSTRMNTRAL VYDAADMDHL
KLVHEYVVPL PTFDSKGKVA VAAQSEILAL SDKTFLMLAR DSNSGQGMKN DTSVYRKIDL
VDLSAATDIA NSEFDDAKPV APKGVVDASV KVAAVTPFID INDNKDLARF GLHNGAPNDA
NNLSEKWEAM SVASALDPAA PDDYFLFVAN DNDFLTQDGY QVGAAYKAEG GADVDTMFQV
FRVTLPGMTA K
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