| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2160 |
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| Symbol | |
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| ID | 7387876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1773428 |
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| End bp | 1774246 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651356 |
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| Product | metal dependent hydrolase |
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| Protein accession | YP_002549551 |
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| Protein GI | 222148594 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.735165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTATC TCCGCCGCTT CACCATTCTG GGATGTTCAT CCTCGCCGGG CGTGCCGCGG
ATCAATGGTG ACTGGGGAGA TTGCGATCCG TTAAACCCGA AAAACAGGCG CACACGCGCG
TCTTTCCTGA TCGAGCAGAT CAGCCCGGAT GGCGGCAAGA CCGTGGTTCT AGTCGATACT
GGCCCGGATT TTCGTGAGCA GATGATCCGT GCGGGTGTCC AATCCCTGGA CGCCGTCGTC
TATAGCCACG CCCATGCCGA CCACTTGCAT GGCATCGACG ACCTGCGCGG CTATTCCTTG
ATGCAGCGCG GACGCATTCC GATCTATGCC GAGCCGGAGA CCATGCGCCG GATAGAGACG
GGGTTCGGTT ACTGCCTGAA GACCCCTGAT GGTAGCAATT ATCCACCCAT CGTGCGTCCC
CATATCATCG AGGACATGGA CAGTCTGATT GAGATTGATG GCGCAGGCGG GCGCATTGCG
CTCATGCCGC TGGAACAGCA GCATGGCGAC ATTATTTCAC TCGGCTTTCG CATCGGTGAT
GTCGCCTATT GCAGCGATGT CAGCGATTTT CCGGAAAAAA CCGTGCCGCG TCTGGCTGGG
CTGGATGTGC TGGTTATCGA TGCCCTGCAA TATAGAGAGC ATCCGAGCCA TTTGTCCCTG
TCGCAATCGC TGGCCTGGAT CGACAGGCTT GCCCCAAAGC GGGCGATATT GACCCATATG
CATATTCCAC TCGATTACGA GACCGTCCTG CGCGAAACGC CTGATCATGT CGAGCCGGCG
TATGACCAGA TGCAATTTGA GCTCACGCTG CCGGCCTGA
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| Protein sequence | MTYLRRFTIL GCSSSPGVPR INGDWGDCDP LNPKNRRTRA SFLIEQISPD GGKTVVLVDT
GPDFREQMIR AGVQSLDAVV YSHAHADHLH GIDDLRGYSL MQRGRIPIYA EPETMRRIET
GFGYCLKTPD GSNYPPIVRP HIIEDMDSLI EIDGAGGRIA LMPLEQQHGD IISLGFRIGD
VAYCSDVSDF PEKTVPRLAG LDVLVIDALQ YREHPSHLSL SQSLAWIDRL APKRAILTHM
HIPLDYETVL RETPDHVEPA YDQMQFELTL PA
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