Gene Avi_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2159 
Symbol 
ID7387875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1772734 
End bp1773420 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content57% 
IMG OID643651355 
Producthypothetical protein 
Protein accessionYP_002549550 
Protein GI222148593 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.575191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACGA TCTCCACCCG CGTTGCCAAG CTTCCGGCCC TGTTGGCGCT GACCGAGCGC 
TACCCTTCGG TATTCTGCTC GGTCGGCACC CATCCCAACA ACGCCAATGA AGAGCTGGAG 
ATCGCTGCGG ACGATCTGGT GCGGCTGGCC GAGACGCATG AGAAAATCGT TGCCATCGGC 
GAATGCGGCC TGGACTACTT CTACGACACC CAGACGCCTG AGGACCAGAA AACCGGTTTC 
CTGCGCCATA TCGAGGCATC GCGCCGCACA CAATTGCCGC TGGTAATCCA TAGCCGCAGT 
GCCGATGACG ACATGGCGCA GATCCTGCGC GATGAGACGG CCAAGGGTGT GTTTCCCTTC 
ATTCTGCATT GCTTTTCGGC GGGCGAGGCT TTGGCTAAAA CCGGGGTCGA GCTGGGCGGC 
TATATTTCCT TTTCTGGCAT TCTGACCTTT CCGAAATCGC AGGAGCTGCG CGATATCGCC 
AAGGAAATTC CAATGGATCG CCTTTTGGTG GAAACCGACG CGCCTTACCT TGCGCCGAAA 
CGCTGGCGTG GAAAACGCAA CGAGCCCTCC TATGTCGTCA ATACGGCAGA GGTGCTGGCC 
GAGGTCAAAG GTGTCAGCTA CGCCGAAATC GCCGCGATCA CCACGGATAA TGCATTGAGA 
CTGTTTTCGA AAATGCCAAG GCTTTGA
 
Protein sequence
MVTISTRVAK LPALLALTER YPSVFCSVGT HPNNANEELE IAADDLVRLA ETHEKIVAIG 
ECGLDYFYDT QTPEDQKTGF LRHIEASRRT QLPLVIHSRS ADDDMAQILR DETAKGVFPF 
ILHCFSAGEA LAKTGVELGG YISFSGILTF PKSQELRDIA KEIPMDRLLV ETDAPYLAPK 
RWRGKRNEPS YVVNTAEVLA EVKGVSYAEI AAITTDNALR LFSKMPRL