| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2157 |
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| Symbol | |
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| ID | 7387873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1770082 |
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| End bp | 1770852 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651353 |
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| Product | permease |
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| Protein accession | YP_002549548 |
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| Protein GI | 222148591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.333715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGCTGT CGGGCTTTGT CGTCGGGTGT CTGGTTGGCA TTACCGGCGT CGGCGGCGCG
TCGCTGATGA CACCGCTGAT GGTGCTGTTG TTCGGCGTTC ATCCGGCAAC CGCCGTAGGG
ACTGATCTGC TCTATGCCGC CGTGACCAAG ATGGCGGGTG CCGCTGTGCA TCATCGCCAC
GGCCATATCC GCTGGCGGCT GGTCGGCCTG CTGGCGTTGG GAAGCGTTCC CGCGACGGGC
CTGACCCTGT GGCTGATGAG CGGCGTTGAC CGCAAGAGCG CCCATTCCGT TGATCTACTG
ACAACCAGCC TCGGCATCAT GCTGATGATG ACAGCGATGA TCCTGCTGTT TCGGGATCTG
CTGGTGCGAT ATGAAATGAA CTGGCTCAAG TCCCACCGCA GCCCAAGCCC ACGCACCATT
GCAATCGGCA CCTTCGTTCT TGGCCTGGTT CTGGGTGCCG TCGTCACGCT GACATCGGTC
GGTGCTGGGG CCATCGGCGT GACCGTGCTG CTGTTTCTCT ATCCCCGCTC CACCATCAAC
GACATTGTCG GCTCAGATAT TGCCCATGCC ATTCCGCTGA CGCTGATCGG CGGTATCGGC
TATTGGGTGA TCGGCGATGT CAACTGGGTG CTGCTGGGCT CACTGCTGAT CGGCTCCATC
CCCGGTATCG TGTTGGGCAG CTATGCCGCA CCACGCCTGC CGGAAAAGGC AGTGAGAATT
ATCCTCGCCC TCATTCTGGT GATCGTCGCG GCGAAATTGA TCTCGTTGTA G
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| Protein sequence | MSLSGFVVGC LVGITGVGGA SLMTPLMVLL FGVHPATAVG TDLLYAAVTK MAGAAVHHRH
GHIRWRLVGL LALGSVPATG LTLWLMSGVD RKSAHSVDLL TTSLGIMLMM TAMILLFRDL
LVRYEMNWLK SHRSPSPRTI AIGTFVLGLV LGAVVTLTSV GAGAIGVTVL LFLYPRSTIN
DIVGSDIAHA IPLTLIGGIG YWVIGDVNWV LLGSLLIGSI PGIVLGSYAA PRLPEKAVRI
ILALILVIVA AKLISL
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