| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2078 |
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| Symbol | |
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| ID | 7386887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1705531 |
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| End bp | 1707375 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651296 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549491 |
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| Protein GI | 222148534 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.142171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGAAAC CTTCACTGAA CCGGGCGCTG ATTGCAGTCC TCCTGACCAC GTCCACGGTT
GTGGCCGCCC TGCCGCAGAC GGCGAGCGCC ACGACCCTGA TGGATCTGCT GCGTGGCAGG
TCGGAGGAAC GCCGCCAACC AGCGCCGGCG GAAATCATTC CCCAGGCCCA ATTGCGCGAT
CCAGAGCCGA TCCAGAAGGT CGCCGCACCT CGCTATTATG CCTATAAGGC CGAGAACAAG
CGTGCGATCT CAATCAAGGC ACCGGACATG CCGATCCCGG TTTTCGGTGA AGACCATGCC
TTGGCCGTCG CTCATCTCGC CATGTCGCAG GTCAAGGTCG AAGCCACGCC CGACGTGGCG
CAGGCTGTGG AAAACTATTA TAACAACAAG GGCGCGTTGA TCTGGGCCAG CGATACCGCC
ATCACCGACA AGGCGAAGTC GGCGGTTGCC GCCCTGGCAA CGGCTGATAC GGCAGGGCTT
GAGCCAGCCG ATTATGCGGT GAAAGTCCCT GATGGTCTCG ACACCATGCC CGAAGACGCC
CGCCGCCAGG CGTTGATGGC CTTCGAACTC AACCTTTCGG CCAAGATCCT GACCTATGTT
CAGGACACGG TGCGCGGCAG GCTCGATCCG AACCGTATTT CAGGCTATCA CGATTTCAAG
CGCAAGACTG TCAATCTCGA TCCGGTGCTG GATCTGGTGC GCTCCAGCCC GGATATCGCT
GCCTATCTGC ATGGCCGCGA TCCGGCCAGC CCGCAATTCC AGGCGCTGAA GGCTGAGCTT
GCCAAATTGG TGGCAGAGGC CAATCAGCAG CAGAGCAAGC CCGTAAAAAT CAATCTGACC
GGCGTTTTGA AGCCTGGCGG CAGCAATCCT GAGCTTGCCA ATATCGTCGA AGGCATCAAG
ACCTATGGCA GCGACGCGCT GAAGACCGAG CATGCGCTGA CGCTGACCGA CTACACTGGC
ACGCCGGATT ACACACCGGA ACTGGTGGCG CTGGTCGAGA GCTACCAGAA GGAACGCGGT
CTGAAACCGG ATGGCGTCAT TGGCCAGGCA ACGGTCCGCA CCATGGTCGG ACATTCGAAT
GCCGAGAAGA TCGAAAAGCT CGTGGTTGCC ATGGAGCAAT TGCGCTGGTT GCCTGCCGAT
CTGGGGCCGC GCTATGTGTT CATCAACCAG CCGGCTTTCG AGGCCTATTA TTTCAACGAC
CGCCAGCAGC AGATTGCCAT GAAGGTCGTG GTCGGTGCGC CGCAGCACCA GACTTTCTTC
TTCCAGAACA TGATCCAGAC GGTGGAATTC AACCCTTATT GGGGCGTTCC GCGGTCGATC
ATCGTCAACG AAATGCTGCC CAAGCTGCGC CAGGACCCGA GCTATCTCGA TCGTCTCGGC
TATGAAGTCA GCTACAAGGG CCGCAAGGTG GCCTCCTCGC AAGTCGATTG GTACACGACA
AGCGATGTTG ATGTGCGCCA GCCGCCAAGC AGTGACAATG CGTTGGGCGA CCTGAAGATC
CTGTTCCCGA ATGCCCATGC GATCTACATG CATGACACAC CGGCGAAGAG CTTCTTCAAG
CGCGATATGC GCGCGCTCAG CCACGGCTGT GTGCGTCTTG CCGAGCCCCG CGTCATGGCC
GCAGCCGTGA TGGGTACGAC AGTTGAAGAC ATCGATGCGC AGATTGCTTC CGGCCAGAAC
CGCGCCGTGC AGGTGCCGCA GAAGTTCCCT GTTTATGTCG CCTATTTCAC CGCCTGGCCG
GATAAGGATG GAGTGGTCCG CTATTACGAC GACGTTTATG GCCGCGATGA AGCGACCCGC
AAGGCCTTCG ACGTGACATC GACCTCTCGC GGCGTGCAGA GTTGA
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| Protein sequence | MQKPSLNRAL IAVLLTTSTV VAALPQTASA TTLMDLLRGR SEERRQPAPA EIIPQAQLRD
PEPIQKVAAP RYYAYKAENK RAISIKAPDM PIPVFGEDHA LAVAHLAMSQ VKVEATPDVA
QAVENYYNNK GALIWASDTA ITDKAKSAVA ALATADTAGL EPADYAVKVP DGLDTMPEDA
RRQALMAFEL NLSAKILTYV QDTVRGRLDP NRISGYHDFK RKTVNLDPVL DLVRSSPDIA
AYLHGRDPAS PQFQALKAEL AKLVAEANQQ QSKPVKINLT GVLKPGGSNP ELANIVEGIK
TYGSDALKTE HALTLTDYTG TPDYTPELVA LVESYQKERG LKPDGVIGQA TVRTMVGHSN
AEKIEKLVVA MEQLRWLPAD LGPRYVFINQ PAFEAYYFND RQQQIAMKVV VGAPQHQTFF
FQNMIQTVEF NPYWGVPRSI IVNEMLPKLR QDPSYLDRLG YEVSYKGRKV ASSQVDWYTT
SDVDVRQPPS SDNALGDLKI LFPNAHAIYM HDTPAKSFFK RDMRALSHGC VRLAEPRVMA
AAVMGTTVED IDAQIASGQN RAVQVPQKFP VYVAYFTAWP DKDGVVRYYD DVYGRDEATR
KAFDVTSTSR GVQS
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