| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2007 |
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| Symbol | |
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| ID | 7386834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1647964 |
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| End bp | 1649505 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643651240 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549436 |
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| Protein GI | 222148479 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.836412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCA TAAGATTTAT TATATTTCAA TTAAATAGAG TTCGCCACAT TTTCAATGTG
GCGAACTCTA TTTTTTCATT GAAGACAGTT GGCAAATACG GGAAACAGAA AGAAAGCACT
TTAATTTTTT TTGACCGTGA TTTTTACTTA AATACATACA TTGACGTTCA TGCCTCTGGA
ATTGACCCGA TCTACCACTA CGTCGCTAAT GGCTGGAAGG AAGGTCGCTC TCCTTTCCAA
TATTTTAATG TTCAGGCTTT TTCGAAAGCC CATCCTCGCC TAGAGGCGTT AAACGTTGAC
CTCGCCCAGG CCTGTATTCG GCTCTATGGC TCCTATGCTT GGCAAAGTCA CATCGAGTGT
TTCGGAATTG CGACTGATCT GTGTTTACCC GTTTCATTCA CTTCGACCGA GCGACGTAGA
TTACGTAAAA AATGGACGCG ATATCGTGAT TTTTTCGATG CTGAATTCTA TTTAAAAGAA
TACCCGGATA CCGCAATGAC ACCTGCTGGA GCCTTTATGC ATTATATGCA TTGGGGCTTT
TCGGAGGATC GCCAGCCTCG GGCGGATTTT GACGGGTATT ACTATCGTAA GGCTAATGGC
CTTAGCCGCG GGCAAAACCC TTTCCAGCAT TGCATTGAGA GCATGGATGG GGGCCAGAAA
TTTCCGGCTA ACGTGGAGAG CCGACCAGGA GTACAGTTAT TTTCGAAACC ACCGTTCGCC
GAGGACATAA CCATAGATTC TTCGAATACG GTGGCTTTGC AATTGAGCCT CTGTATTCAT
GTCCATTGTT TTTATGTTGA ATTGTTCAAT GAGATCGCTG ATCGGCTTCA GTGTTTGACG
CTGCCGTTCT ACCTCGTGGT AACTGTTTGC AATGAGAGTG ATGCAAAGGT AGTGGAGAAT
CTTCTGGTCG ACTTCAATCA GCGGCAAAAT ACCCACATTC TCGTGGTCGA GAACAGAGGC
CGCGACATTG CGCCTTTTCT TATTGATGCC AGCCCGATAT GGCGAAAGTC AGATTTGGTT
TTGCATCTTC ACACGAAGAA AAGCCCGCAT ATTACATGGG GTGACAACTG GCGTCGGTAT
CTCTTCGATC AAACAATTGG ATACGAGCCT TTGCTGAAAG GTATAATCGA TCAATTCCAA
GATCGGGACG ATATGGGCAT GATGTACCCA GAAAATTTCT GCATGATTAA GCACTTTACG
GAAGAAGAAA AAAATAAAGA CGCCATCCGT TACATCGCAC AAAAACTTCG TTTGGAATGT
AGTTTTGAGG CACTAGGTGC ATATGCGGCC GGTTCCATGG CTTTTTACAG GGTAAAGGCA
CTCGCCAGTG TTCTCGAATA TGATGCACTA GAAAATCTTT TCGGGCCTGA ACAAGGGCAG
CTTGACGGAA CAGCGGCGCA TGTTCTCGAG AGGTTACTTC CAGAGATGGT ACGGTTAAAT
GGTTTTGAAA CGCAGCCTTA TTTTTTGATC GAGGCTGAAG CAGTCGGCCT GCGCAGGCAA
AAGTGCGGCA ACGATGCCAA ATCGTGCCAA GCCGAACAGT AA
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| Protein sequence | MNFIRFIIFQ LNRVRHIFNV ANSIFSLKTV GKYGKQKEST LIFFDRDFYL NTYIDVHASG
IDPIYHYVAN GWKEGRSPFQ YFNVQAFSKA HPRLEALNVD LAQACIRLYG SYAWQSHIEC
FGIATDLCLP VSFTSTERRR LRKKWTRYRD FFDAEFYLKE YPDTAMTPAG AFMHYMHWGF
SEDRQPRADF DGYYYRKANG LSRGQNPFQH CIESMDGGQK FPANVESRPG VQLFSKPPFA
EDITIDSSNT VALQLSLCIH VHCFYVELFN EIADRLQCLT LPFYLVVTVC NESDAKVVEN
LLVDFNQRQN THILVVENRG RDIAPFLIDA SPIWRKSDLV LHLHTKKSPH ITWGDNWRRY
LFDQTIGYEP LLKGIIDQFQ DRDDMGMMYP ENFCMIKHFT EEEKNKDAIR YIAQKLRLEC
SFEALGAYAA GSMAFYRVKA LASVLEYDAL ENLFGPEQGQ LDGTAAHVLE RLLPEMVRLN
GFETQPYFLI EAEAVGLRRQ KCGNDAKSCQ AEQ
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