Gene Avi_2001 details

Gene Information

• Locus tag: Avi_2001
• ID: 7386831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1646008
• End bp: 1646625
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643651237
• Product: hypothetical protein
• Protein accession: YP_002549433
• Protein GI: 222148476
• COG category: [R] General function prediction only
• COG ID: [COG3179] Predicted chitinase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.390134
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCATTA TGGATCGCGC GAAATTCTTC GCGGCGGTAC GCTCGTCGCT GTTCGGCGGT 
GCGCTCACGC AAAATCAGGT GAATGGTATC ACGGCCATTC TCGACGCCTG GCAGGCCAGC 
ACAATGACCG ATCTGCGGTG GCTGGCTTAT ATGCTGGCCA CGGCGTTTCA CGAAACAGCA 
CAGACCATGC AGCCGGTTCG CGAAACGCGA GCGGCAACGG ATAAACAGGC TATCGCCATT 
CTGGACCGCT CTTGGGCGAA AGGCACGATG CCCTGGGTAA AGTCACCTTA TTGGCGGATT 
GGAGCCGATG GCAAGAGCTG GCTTGGACGT GGATATGTCC AGCTCACGCA CAAGGGCAAC 
TACAACACGT TGGGTAATGC TATTGGCGTT GATTTGGTGG CCAATCCGGT TTTGGCGATG 
CGCGAAGACA TCGCCCTGAA GGTGATGTTT ATCGGCATGA GCGACGGCCT GTTCACCGGC 
GTCAAGCTGG CTGATTTTTT CCATGGCACC AAGACTGATT GGGTGAATGC CCGCCGCATT 
ATCAACAGCA CGGAAAGCGC CAGCGTTGTT GCTGGCTATG GCAAGGCCTT CCATGTGGCG 
CTGGTGGGGG CGGCATGA 

 

Protein sequence

MIIMDRAKFF AAVRSSLFGG ALTQNQVNGI TAILDAWQAS TMTDLRWLAY MLATAFHETA 
QTMQPVRETR AATDKQAIAI LDRSWAKGTM PWVKSPYWRI GADGKSWLGR GYVQLTHKGN 
YNTLGNAIGV DLVANPVLAM REDIALKVMF IGMSDGLFTG VKLADFFHGT KTDWVNARRI 
INSTESASVV AGYGKAFHVA LVGAA