| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1967 |
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| Symbol | |
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| ID | 7387253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1621454 |
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| End bp | 1623268 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651216 |
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| Product | Phage terminase protein |
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| Protein accession | YP_002549412 |
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| Protein GI | 222148455 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGATT CGATTGATGT CGAGATCCCG GATGTCAGCT ATGACGATGA TCCGGTGACC
GCCTGGGCGA CGGATGTGGT GCGCGGCGAT ATCGTTGCCG GTCCCCATGT TCGCAATGCC
TGCCGTCGTC ACCTGCGCGA TCTCATCGAC GGCCCGGCCC GGGGACTGGT CTGGGATCTG
GAGACCTCGA ACAAGCGGAT CAAGTGGTTC GGCTCCAAGC TGCGTCTGAA TGGCGGGCAA
TTCGAGGGAC GGCGGTTTCG GCTGCATCCG AGCCAGGCCT TTCGGGTCGG TTCGCTGTTC
GGCTGGAAAT GGGCCGATAC CGGCTTGCGG CGGTTCCGGC GCTTCTATGA CGAAGAAGGC
AAGGGCAACG GCAAGTCGCC ATTGCTGGCC GGCATTGGCA TCTGCATGAT GGTGGCCGAT
GGCGAACCCC GTGCCGAGAT CTATGCGGCG GCGGCCAAGA AAGACCAGGC GCAGGTGCTG
TTTCGTGATG CGGTTGCCAT GCGCGACCAG TCGCCGGAAC TGATGAGGCG GATTACCACC
TCGGGGGAAA ACCCGGTCTG GCAGCTCACG TACATCAGCA AGGGCGGCGA CAAGCGGTTC
TTCAAACCGA TCTCGGCGGA TAAGGCGCAA TCGGGTCCGC GTCCGTCCTG TGCGCTGTGC
GATGAGGTGC ATGAACATCC AAACCGCGAT GTCATCGAAA TGCTGGAGCG CGGCTTTAAA
TTCCGCAAAC AGCCGTTGTT GGTGATGGCG ACCAATTCCG GCTCCGACCG CAAATCGATT
TGCTGGGAAG AGCATCAGCA TGCGGTCAGT GTCGCGGCGG GCATCGTCCA GGACGACACG
ACATTCGCCT TTGTCTGCTC GCTCGATGAG GGCGATGATT GGGAAAACGA TCCGTCCTGC
TGGGTGAAGG CAAACCCGCT GCTGGATGTG ACGATCACCA CGGATTATCT GCATGGGGTC
GTTGACCAGG CGCGGATGAT GCCCGGCAAA CGAAACGGCA TTGCCCGGCT GCACTTTTGC
GAATGGACGC AATCAGTCAA TGCGGCGATC AAGCGTGAGG CCTGGATGGC CTGCCAGAAG
GATCTCGATC TTGACTGGCT GATAGAGCAA GGTTTTCCCT GCTATGGCGG CCTCGACCTG
TCGCGCACCC GTGACTTTAC CGCGCTGACC CTGATCTGGG TGCTTGACAG TACCAAGGAT
GCTGAGCGGT TTGCGTCAAA GACATGGTTC TGGACACCTG CCGATACGCT GGAGGATCGG
GCCAATACCG ACCAGGCCCC CTATGACCTC TGGCGTGACC AGGGTTTTAT CGAGGCGGTG
CCCGGCCAGC GGCTCAAATA TCCGTGGCTC GCTGGAGCCT TGGCCGAGAT CTGCGCAAAG
TTCGAACCGA CTGAGATCGG CGCCGACCAG TACGGGTTGG AGCAATTGTC CGAGCATCTG
GAAGACCAGG GTGTTTCCCT ACCGCTGACC ATCCACCCGC AGGGCTTCCA GCGCCGGGTG
CTGGAGCGCG ATCCTGACGC ACCGGATGGT GAGCAGGATA TCTATCTCTG GATGCCGCAC
AGCATCAACA AGCTCGAGAA CGCGCTCTAT GAGACGCGCA TCGAGATCGA CCCGAACCCG
ATGCTGGACA GTTGTGCGGC CAGCACCGTC TTTGCAGAAA ACCGCACCGG CCATCGGATG
TTCGACAAGG AACATGCCTT TGGCCGCATC GACGGCATGG TGTCTTTGGC CATGTCGATG
GGCATGGCGA TGTGCCGTGT TCGTGCCTCC CAGGCATCCC CATGGGATGA CCCGGATTAC
TCCATACATC AATAA
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| Protein sequence | MMDSIDVEIP DVSYDDDPVT AWATDVVRGD IVAGPHVRNA CRRHLRDLID GPARGLVWDL
ETSNKRIKWF GSKLRLNGGQ FEGRRFRLHP SQAFRVGSLF GWKWADTGLR RFRRFYDEEG
KGNGKSPLLA GIGICMMVAD GEPRAEIYAA AAKKDQAQVL FRDAVAMRDQ SPELMRRITT
SGENPVWQLT YISKGGDKRF FKPISADKAQ SGPRPSCALC DEVHEHPNRD VIEMLERGFK
FRKQPLLVMA TNSGSDRKSI CWEEHQHAVS VAAGIVQDDT TFAFVCSLDE GDDWENDPSC
WVKANPLLDV TITTDYLHGV VDQARMMPGK RNGIARLHFC EWTQSVNAAI KREAWMACQK
DLDLDWLIEQ GFPCYGGLDL SRTRDFTALT LIWVLDSTKD AERFASKTWF WTPADTLEDR
ANTDQAPYDL WRDQGFIEAV PGQRLKYPWL AGALAEICAK FEPTEIGADQ YGLEQLSEHL
EDQGVSLPLT IHPQGFQRRV LERDPDAPDG EQDIYLWMPH SINKLENALY ETRIEIDPNP
MLDSCAASTV FAENRTGHRM FDKEHAFGRI DGMVSLAMSM GMAMCRVRAS QASPWDDPDY
SIHQ
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