| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1948 |
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| Symbol | lipB |
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| ID | 7387242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1609647 |
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| End bp | 1610378 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651204 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_002549401 |
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| Protein GI | 222148444 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTCGTT CCGATCTCGA TAAGTCCATG CTTGCCAGCC CTGGCAATGC GCCGATCCGG
TGGCGGGTCA GCGACGGACT TGTTGGCTAT GAGGATGCGT TGCGCGTGAT GGAGGAGGAA
GTGGCAGCTA TTGCCGATGG CACCACCGAC GAGCTGATCT GGCTGCTGGA ACATCCGCCG
ATCTACACGG CAGGCACCAG TGCCGATCCG AAGGATTTGA TCGACACGCA GCGCTTTCCG
GTTTTTGCCA CCGGACGTGG TGGTGAATAT ACCTATCACG GACCGGGCCA GCGTGTCGTC
TATGTCATGC TGGATTTGAA GCGGCGCCGC CAGGACGTAC GAGCCTATGT CGCCGCCCTG
GAAGACGTTA TTATCAAAAC ACTGGATATG ATGAATATTC GCGGCGAGCA GCGAGAAGAT
CGGGTCGGGG TCTGGGTTCG CCGGCCAGAT AAGGCACCTC TACCGGACGG TAGCGTTACT
GAAGACAAGA TCGCCGCGCT TGGCATTCGT CTGCGCCGCT GGGTCAGTTT TCACGGCCTG
TCTTTAAATG TCGAGCCAGA CCTGTCTCAT TTCAGCGGCA TCGTACCCTG TGGCATCTCT
GCCTATGGCG TCACCAGCCT TGTCGATCTC GGTCTGCCTG TGACGATGAA CGATGTGGAT
ATTCATCTCA AAGAGGCATT TGAAACGGTG TTCGGCCCGA CAGTGGCCGA CCAGCATATA
AAGCCACGGT AA
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| Protein sequence | MLRSDLDKSM LASPGNAPIR WRVSDGLVGY EDALRVMEEE VAAIADGTTD ELIWLLEHPP
IYTAGTSADP KDLIDTQRFP VFATGRGGEY TYHGPGQRVV YVMLDLKRRR QDVRAYVAAL
EDVIIKTLDM MNIRGEQRED RVGVWVRRPD KAPLPDGSVT EDKIAALGIR LRRWVSFHGL
SLNVEPDLSH FSGIVPCGIS AYGVTSLVDL GLPVTMNDVD IHLKEAFETV FGPTVADQHI
KPR
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