Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1931 |
Symbol | |
ID | 7387233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1600133 |
End bp | 1601020 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643651195 |
Product | C32 tRNA thiolase |
Protein accession | YP_002549392 |
Protein GI | 222148435 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCTTG CATTTGCGGG AAGCGCGACG GAACGCACCG AGGCCGATGA GGCCGAAGAC GCGCAGGAGA ATGTTCGTCA TCCCCTGTTT AGGGCCGCAC CACAATCGGT ATCCTTCAAC AAGCTACGCA AGCGGTTGCT GCGCCAAGTG CGCCAGGCAA TGGACGATTT CGGCATGCTC AACGGCCAGA AGCGCTGGCT GATTGGGCTT TCCGGTGGCA AGGACAGCTA TGGTCTGCTG GCGTTGCTGA TGGATTTGAA ATGGCGCGGC CTGCTGCCCG TCGAGCTGAT CGCCTGCAAT CTCGATCAGG GGCAACCGAA TTTTCCCAAA CATGTCCTGC CGGATTACCT GAAATCCATC GGCATGCCGC ATCGCATCGA ATATCGAGAT ACTTATTCCA TCGTCAAGGA AAAGGTCCCG GCGGGCGGCA CCTATTGTTC GCTCTGCTCG CGGCTGCGGC GCGGTAATCT CTACCGCATC GCCCGCGAAG AAGGCTGTGA TGCGCTGGTG CTCGGCCATC ACCGCGAAGA TATTCTTGAA ACCTTCTTCA TGAATTTTTT CCATGGTGGC CGGTTGGCGG CTATGCCGGC CAAGCTGTTG AACGATGAGG GCGATCTGTT CGTGCTGCGG CCATTGGCCT ATGCGGCGGA AGACGACCTC GCCAAATTCG CTGCCGCCAT GCAATTTCCA ATCATTCCCT GCGATCTCTG CGGATCGCAA GATGGTTTAC AGCGCAATGC CATGAAGGAC ATGCTGGCTG GAATCGAAGC CAAGATGCCA GGCCGCAAGG ATGCGATGCT GAGGGCATTG TCGCATGTGA ACCCCTCGCA TCTGCTTGAT CCGGCACTTT TTGACTTTTC CGGGCTGGTT GTCACGAAGC CGTCATAA
|
Protein sequence | MNLAFAGSAT ERTEADEAED AQENVRHPLF RAAPQSVSFN KLRKRLLRQV RQAMDDFGML NGQKRWLIGL SGGKDSYGLL ALLMDLKWRG LLPVELIACN LDQGQPNFPK HVLPDYLKSI GMPHRIEYRD TYSIVKEKVP AGGTYCSLCS RLRRGNLYRI AREEGCDALV LGHHREDILE TFFMNFFHGG RLAAMPAKLL NDEGDLFVLR PLAYAAEDDL AKFAAAMQFP IIPCDLCGSQ DGLQRNAMKD MLAGIEAKMP GRKDAMLRAL SHVNPSHLLD PALFDFSGLV VTKPS
|
| |