Gene Avi_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1931 
Symbol 
ID7387233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1600133 
End bp1601020 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content57% 
IMG OID643651195 
ProductC32 tRNA thiolase 
Protein accessionYP_002549392 
Protein GI222148435 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTG CATTTGCGGG AAGCGCGACG GAACGCACCG AGGCCGATGA GGCCGAAGAC 
GCGCAGGAGA ATGTTCGTCA TCCCCTGTTT AGGGCCGCAC CACAATCGGT ATCCTTCAAC
AAGCTACGCA AGCGGTTGCT GCGCCAAGTG CGCCAGGCAA TGGACGATTT CGGCATGCTC
AACGGCCAGA AGCGCTGGCT GATTGGGCTT TCCGGTGGCA AGGACAGCTA TGGTCTGCTG
GCGTTGCTGA TGGATTTGAA ATGGCGCGGC CTGCTGCCCG TCGAGCTGAT CGCCTGCAAT
CTCGATCAGG GGCAACCGAA TTTTCCCAAA CATGTCCTGC CGGATTACCT GAAATCCATC
GGCATGCCGC ATCGCATCGA ATATCGAGAT ACTTATTCCA TCGTCAAGGA AAAGGTCCCG
GCGGGCGGCA CCTATTGTTC GCTCTGCTCG CGGCTGCGGC GCGGTAATCT CTACCGCATC
GCCCGCGAAG AAGGCTGTGA TGCGCTGGTG CTCGGCCATC ACCGCGAAGA TATTCTTGAA
ACCTTCTTCA TGAATTTTTT CCATGGTGGC CGGTTGGCGG CTATGCCGGC CAAGCTGTTG
AACGATGAGG GCGATCTGTT CGTGCTGCGG CCATTGGCCT ATGCGGCGGA AGACGACCTC
GCCAAATTCG CTGCCGCCAT GCAATTTCCA ATCATTCCCT GCGATCTCTG CGGATCGCAA
GATGGTTTAC AGCGCAATGC CATGAAGGAC ATGCTGGCTG GAATCGAAGC CAAGATGCCA
GGCCGCAAGG ATGCGATGCT GAGGGCATTG TCGCATGTGA ACCCCTCGCA TCTGCTTGAT
CCGGCACTTT TTGACTTTTC CGGGCTGGTT GTCACGAAGC CGTCATAA
 
Protein sequence
MNLAFAGSAT ERTEADEAED AQENVRHPLF RAAPQSVSFN KLRKRLLRQV RQAMDDFGML 
NGQKRWLIGL SGGKDSYGLL ALLMDLKWRG LLPVELIACN LDQGQPNFPK HVLPDYLKSI
GMPHRIEYRD TYSIVKEKVP AGGTYCSLCS RLRRGNLYRI AREEGCDALV LGHHREDILE
TFFMNFFHGG RLAAMPAKLL NDEGDLFVLR PLAYAAEDDL AKFAAAMQFP IIPCDLCGSQ
DGLQRNAMKD MLAGIEAKMP GRKDAMLRAL SHVNPSHLLD PALFDFSGLV VTKPS