Gene Avi_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1917 
Symbol 
ID7387222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1586402 
End bp1586884 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content52% 
IMG OID643651184 
Producthypothetical protein 
Protein accessionYP_002549381 
Protein GI222148424 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCGA AAGGTCTCGG AATGGCATTT TCCATTCGCG TTGATAAACT CATCCAGGCT 
CCGATCAGTC GCGTCTATAA AGCGTTTCTT GACGAGCAGG CTGTTGTACA ATGGATGCAG
AGGAAGGACT TTACCTGCCA ACCGCTTCAT TTCGATGGAC GCGAAGGTGG CGGTTACAGG
ATTCGTTTTA GCAGCACCAC GTCAGATTTA AGTTACGTGA TGATTGGCGA ATTCGATGAA
TTGGTCCTCA ATGAGCGCAT TCGCTACACA GAAAGAATGG ATGACCCGTT CTGGACTGCG
CGGGTTGAGA CCGTCATCCA GCTGAAACCG ACAGCAAGAG GAACGGACCT GTCAATCGTT
CAATCCGGTA TTCCGGATAC GGTATCGCAA GAGGGAGTCC GACTGGCCTG GGACGAATGT
CTGCGACAGC TTGCCTGCCT GGTCGAACAA TTGACTGAGA GCCTACACGC GCGAACGCGA
TAA
 
Protein sequence
MGAKGLGMAF SIRVDKLIQA PISRVYKAFL DEQAVVQWMQ RKDFTCQPLH FDGREGGGYR 
IRFSSTTSDL SYVMIGEFDE LVLNERIRYT ERMDDPFWTA RVETVIQLKP TARGTDLSIV
QSGIPDTVSQ EGVRLAWDEC LRQLACLVEQ LTESLHARTR