Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1917 |
Symbol | |
ID | 7387222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1586402 |
End bp | 1586884 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643651184 |
Product | hypothetical protein |
Protein accession | YP_002549381 |
Protein GI | 222148424 |
COG category | [S] Function unknown |
COG ID | [COG3832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCGA AAGGTCTCGG AATGGCATTT TCCATTCGCG TTGATAAACT CATCCAGGCT CCGATCAGTC GCGTCTATAA AGCGTTTCTT GACGAGCAGG CTGTTGTACA ATGGATGCAG AGGAAGGACT TTACCTGCCA ACCGCTTCAT TTCGATGGAC GCGAAGGTGG CGGTTACAGG ATTCGTTTTA GCAGCACCAC GTCAGATTTA AGTTACGTGA TGATTGGCGA ATTCGATGAA TTGGTCCTCA ATGAGCGCAT TCGCTACACA GAAAGAATGG ATGACCCGTT CTGGACTGCG CGGGTTGAGA CCGTCATCCA GCTGAAACCG ACAGCAAGAG GAACGGACCT GTCAATCGTT CAATCCGGTA TTCCGGATAC GGTATCGCAA GAGGGAGTCC GACTGGCCTG GGACGAATGT CTGCGACAGC TTGCCTGCCT GGTCGAACAA TTGACTGAGA GCCTACACGC GCGAACGCGA TAA
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Protein sequence | MGAKGLGMAF SIRVDKLIQA PISRVYKAFL DEQAVVQWMQ RKDFTCQPLH FDGREGGGYR IRFSSTTSDL SYVMIGEFDE LVLNERIRYT ERMDDPFWTA RVETVIQLKP TARGTDLSIV QSGIPDTVSQ EGVRLAWDEC LRQLACLVEQ LTESLHARTR
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